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VERSION:2.0
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CALSCALE:GREGORIAN
BEGIN:VEVENT
DTSTAMP:20260809T163359Z
UID:f314bc40-89a7-4760-b803-5aa436424975
DTSTART:20170608T083000Z
DTEND:20170608T163000Z
DESCRIPTION:The workshop will cover the basics of de novo genome assembly u
 sing a small genome example. This includes project planning steps\, select
 ing fragment sizes\, initial assembly of reads into fully covered contigs\
 , and then assembling those contigs into larger scaffolds that may include
  gaps. The end result will be a set of contigs and scaffolds with sufficie
 nt average length to perform further analysis on\, including genome annota
 tion (link to that nomination). This workshop will use tools and methods t
 argeted at small genomes. The basics of assembly and scaffolding presented
  here will be useful for building larger genomes\, but the specific tools 
 and much of the project planning will be different.\n\nThis workshop will 
 also introduce genome annotation in the context of small genomes. We’ll 
 begin with genome annotation concepts\, and then introduce resources and t
 ools for automatically annotating small genomes. The workshop will finish 
 with a review of options for further automatic and manual tuning of the an
 notation\, and for maintaining it as new assemblies or information becomes
  available.\n\nThis session will include an introduction to the [Galaxy pl
 atform](https://galaxyproject.org/).\n\nThis event is co-organized with [E
 MBL-ABR](https://www.embl-abr.org.au/) and the [Genomics Virtual Lab](http
 s://www.gvl.org.au). Course materials can be found [here](http://tinyurl.c
 om/cambridge-assembly-2017).\n\nPlease note that if you are not eligible f
 or a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/rav
 en/n5) account you will need to book by linking [here](http://bioinfotrain
 ing.bio.cam.ac.uk/booking-form/?event-id=2165950&amp\;course-title=Analysi
 s%20of%20RNAseq%20data%20using%20Galaxy).''
LOCATION:Craik-Marshall Building
SUMMARY:Bacterial Genome Assembly and Annotation in Galaxy
URL;VALUE=URI:http://training.csx.cam.ac.uk/bioinformatics/event/2165950
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