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DTSTAMP:20260615T115848Z
UID:44c9c2b6-4463-4655-819d-d5b3bfaa89ef
DTSTART:20201102T080000Z
DTEND:20201105T160000Z
DESCRIPTION:Advance your epigenetics research with NGS methods.\n\nIn a nut
 shell\n- Learn how bisulfite sequencing works\n- Understand how bisulfite-
 treated reads are mapped to a reference genome\n- Perform basic analyses (
 call methylated regions\, perform basic downstream analyses)\n- Use shell 
 scripting to create reusable data pipelines\n- Visualize results (ready-to
 -publish)\n\nThe purpose of this workshop is to get a deeper understanding
  of the use of bisulfite-treated DNA in order to analyze the epigenetic la
 yer of DNA methylation. Advantages and disadvantages of the so-called 'bis
 ulfite sequencing' and its implications on data analyses will be covered. 
 The participants will be trained to understand bisulfite-treated NGS data\
 , to detect potential problems/errors and finally to implement their own p
 ipelines. After this course they will be able to analyze DNA methylation a
 nd create ready-to-publish graphics.\n\nBy the end of this workshop the pa
 rticipants will:\n - be familiar with the sequencing method of Illumina\n 
 - understand how bisulfite sequencing works\n - be aware of the mapping pr
 oblem of bisulfite-treated data\n - understand how bisulfite-treated reads
  are mapped to a reference genome\n - be familiar with common data formats
  and standards\n - know relevant tools for data processing\n - automate ta
 sks with shell scripting to create reusable data pipelines\n - perform bas
 ic analyses (call methylated regions\, perform basic downstream analyses)\
 n - plot and visualize results (ready-to-publish)\n - be able to reuse all
  analyses\n
LOCATION:PC-COLLEGE Berlin\, 78\, Stresemannstraße
SUMMARY:DNA Methylation Data Analysis Workshop 
URL;VALUE=URI:https://www.ecseq.com/workshops/workshop_2020-06-NGS-DNA-Meth
 ylation-Data-Analysis
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