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DTSTAMP:20260704T230905Z
UID:8a1602fb-d1ea-4018-819c-ab0069083078
DTSTART:20211028T090000Z
DTEND:20211029T170000Z
DESCRIPTION:Educators:\nAbdulrahman Salhab\, Epigenetics Department @ Saarl
 and University (de.NBI-Epi / HD-HuB) \n\nDate:\n28-29 October 2021\n\nLoca
 tion:\nOnline\n\nContents:\nThis course aims to convey basic knowledge on 
 the bioinformatic processing of DNA methylation data. Following the outlin
 e of a standard experiment we discuss qualities of various assays and when
  they are beneficial. In the first half there will be a slight focus on se
 quencing data. We will prepare raw sequence reads for alignment\, methylat
 ion calls and identification of differentially methylated sites or regions
 . Throughout\, we consider how experimental settings interact and influenc
 e the results and how quality control can be used to understand generated 
 data and might improve on subsequent experiments. The second half will foc
 us on how to evaluate the data and connect it to public resources to furth
 er understanding of the results. Presentations will be interleaved with pr
 actical sessions\n\nLearning goals:\n    • Understand the bioinformatic 
 processing of DNA methylation\n    • Preparation and description of raw 
 read files\n    • Basic generation of methylation calls and differential
 ly methylated regions\n    • How to evaluate DNA methylation data\n\nPre
 requisites:\nThe course requires basic skills in:\n    • Linux/bash\n   
  • R\n\nKeywords:\nDNA methylation\n\nTools:\nnf-core/methylseq\, RnBead
 s\, methylSeekR
SUMMARY:DNA Methylation: Design to Discovery 2021
URL;VALUE=URI:https://www.denbi.de/training/772-dna-methylation-design-to-d
 iscovery-2021
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