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CALSCALE:GREGORIAN
BEGIN:VEVENT
DTSTAMP:20260628T221924Z
UID:3450e07d-fe9f-4cc0-be8d-ad3cbbdadcb7
DTSTART:20231102T080000Z
DTEND:20231103T160000Z
DESCRIPTION:Educators:\nProf. Dr. Jörn Walter\, Dr. Gilles Gasparoni\, Dr.
  Thomas Hentrich\, Nihit Aggarwal\, Lukas Laufer (HD HuB)\n\nDate:\nNovemb
 er 2nd and 3rd\, 2023.\n\nLocation:\nOnline\n\nContents:\nThe workshop aim
 s to convey basic knowledge on the bioinformatic processing of DNA methyla
 tion data. Following the outline of a standard experiment we discuss quali
 ties of various assays and when they are beneficial. In the first half the
 re will be a slight focus on sequencing data. We will prepare raw sequence
  reads for alignment\, methylation calls and identification of differentia
 lly methylated sites or regions. Throughout\, we consider how experimental
  settings interact and influence the results and how quality control can b
 e used to understand generated data and might improve on subsequent experi
 ments. The second half will focus on how to evaluate the data and connect 
 it to public resources to further understanding of the results. Presentati
 ons will be interleaved with practical sessions\n\nLearning goals:\n- Unde
 rstand the bioinformatic processing of DNA methylation\n- Preparation and 
 description of raw read files\n- Basic generation of methylation calls and
  differentially methylated regions\n- How to evaluate DNA methylation data
 \n\nPrerequisites:\nThe course requires basic skills in:\n - Linux/bash\n 
 - R\n\nKeywords: \nDNA methylation\n\nTools: \nnf-core/methylseq\, RnBeads
 \, methylSeekR
SUMMARY:DNA Methylation: Design to Discovery 2023
URL;VALUE=URI:https://www.denbi.de/training/1599-dna-methylation-design-to-
 discovery-2023
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