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DTSTART:20230526T000000Z
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DESCRIPTION:# Overview\n\nThis is a course on bioinformatics resources taug
 ht by the developers of the resources. Bgee is a curated database of gene 
 expression in animals\, including model species such as human\, mouse or d
 rosophila\, and others such as livestock\, primates\, or fishes. Bgee inte
 grates information from single-cell and bulk RNA-seq\, microarrays\, and i
 n situ hybridization. These data are available through a web interface and
  an R package. Bgee also includes tools which use these data\, such as Top
 Anat or Expression Comparison\, and allows integration with users' own dat
 a through another R package. In this course\, we will present the curated 
 and pre-analysed gene expression data in Bgee. \n\n# Audience\n\nThis cour
 se is addressed to life scientists who need to retrieve curated gene expre
 ssion\, obtain expression-based knowledge on genes of interest\, or compar
 e expression between genes and between species.\n\n# Learning outcomes\n\n
 At the end of the course\, the participants are expected to:\n\n* Learn ho
 w to detect active genes from bulk or single-cell RNA-Seq\n* Learn what in
 formation on expression Bgee can provide\n* Understand the added value of 
 Bgee data curation and analysis\n* Learn about Bgee webtools and their uti
 lity to research\n\n\n\n\n\n\n\n\n\n\n# Prerequisites\n\n\n\n\n\n\n\n\n###
  ***Technical***\n\nThis course will be streamed\, you are thus required t
 o have your own computer with an internet connection.\n\n# Schedule - CET 
 time zone\n\n9:00-12:15 CET time zone - Online lectures (Frédéric Bastia
 n and Marc Robinson-Rechavi)\n\n* 9:00-9:10 Welcome\n* 9:10-9:40 Overview 
 of Bgee\n* 9:40-9:50 Q&amp\;A\n* 9:50-10:35 Present and absent calls from 
 transcriptome data\n* 10:35-10:50 Q&amp\;A\n* 10:50-11:05 Break\n* 11:05-1
 1:35 Data integration in Bgee\n* 11:35-11:45 Q&amp\;A\n* 11:45-12:15 Bgee 
 tools\n\n\n\n\n\n\n\n\n\n\n\n\n\n# Application\n\n\n\n**Morning Lecture is
  free of charge\, but registration is mandatory - in this case\, [please u
 se this form](https://forms.office.com/e/uFkUhRyY7f).**\n\nYou will be inf
 ormed by email of your registration confirmation. \n\n\n\n# Venue and Time
 \n\nThis course will be streamed for registered participants.\nThe course 
 will start at 9:00 and end at 12:15 CET. Precise information will be provi
 ded to the participants on due time.\n\n# Additional information\n\nCoordi
 nation: Valeria Di Cola (valeria.dicola@sib.swiss) SIB Training Group\n\n\
 n\nYou are welcome to register to the SIB courses mailing list to be infor
 med of all future courses and workshops\, as well as all important deadlin
 es using the form [here](https://lists.sib.swiss/mailman/listinfo/courses)
 .\n\nPlease note that participation in SIB courses is subject to our [gene
 ral conditions](http://www.sib.swiss/training/terms-and-conditions).\n\nSI
 B abides by the [ELIXIR Code of Conduct](https://elixir-europe.org/events/
 code-of-conduct). Participants of SIB courses are also required to abide b
 y the same code.\n\nFor more information\, please contact [training@sib.sw
 iss](mailto://training@sib.swiss).
SUMMARY:Gene Expression made Useful Easily: Tools and Database of Bgee
URL;VALUE=URI:https://www.sib.swiss/training/course/20230526_BGEEL
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