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DTSTAMP:20260808T153107Z
UID:8be80c66-dde8-4fb5-bc27-557c2aa248df
DTSTART:20190624T083000Z
DTEND:20190626T160000Z
DESCRIPTION:This course will focus on computational methods for analysing c
 ellular images and extracting quantitative data from them. The aim of this
  course is to familiarise the participants with computational image analys
 is methodologies\, and to provide hands-on training in running quantitativ
 e analysis pipelines.\n\nOn day 1 we will introduce principles of image pr
 ocessing and analysis\, giving an overview of commonly used algorithms thr
 ough a series of talks and practicals based on [Fiji](http://fiji.sc/)\, a
 n extensible open source software package.\n\nOn day 2\, we will cover tim
 e series processing and cell tracking using [TrackMate](http://imagej.net/
 TrackMate) and advanced image segmentation using [Ilastik](http://ilastik.
 org/). Additionally\, in the afternoon we will run a study design and data
  clinic (sign up will be required) for participants that wish to discuss t
 heir experiments. \n\nOn day 3\, we will describe the open [Icy platform](
 http://icy.bioimageanalysis.org/) developed at the Institut Pasteur. Icy i
 s a next-generation\, user-friendly software offering powerful acquisition
 \, visualisation\, annotation and analysis algorithms for 5D bioimaging da
 ta\, together with unique automation/scripting capabilities (notably via i
 ts graphical programming interface) and tight integration with existing so
 ftware (e.g. ImageJ\, Matlab\, Micro-Manager).\n\nThe training room is loc
 ated on the first floor and there is currently no wheelchair or level acce
 ss available to this level.\n\nPlease note that if you are not eligible fo
 r a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/rave
 n/n5) account you will need to book or register your interest by linking [
 here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=2871473&
 amp\;course-title=Image%20Analysis%20for%20Biologists).''
LOCATION:Craik-Marshall Building
SUMMARY:Image Analysis for Biologists
URL;VALUE=URI:http://training.csx.cam.ac.uk/bioinformatics/event/2871473
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