BEGIN:VCALENDAR VERSION:2.0 PRODID:icalendar-ruby CALSCALE:GREGORIAN BEGIN:VEVENT DTSTAMP:20260705T011706Z UID:090030cc-8b87-4d1c-9bca-daa616bd03d1 DTSTART:20210317T080000Z DTEND:20210318T170000Z DESCRIPTION:All the PATC courses at BSC are free of charge.\nVenue: Online via Zoom\n\nObjectives: The course will make the attendants familiar with simulation technologies used in Life Sciences and their specific adaptati on to HPC environment\n\nCourse convener: Josep Gelpi\n\nDetailed outline: \nIntroduction to biomolecular simulation\nCoarse-grained and atomistic si mulation strategies\nAutomated setup for simulation\n\nHPC specifics: Larg e scale parallelization\, use of GPU’s\nStorage and strategies for large scale trajectory analysis\n\nLearning Outcomes: Setup\, execute\, and ana lyze standard simulations in HPC environment\n\nLevel: (All courses are de signed for specialists with at least 1st cycle degree or similar backgroun d experience) INTERMEDIATE: for trainees with some theoretical and practic al knowledge.\n\nFurther information:\n\n\nIn the context of virtual meeti ngs\, the Organiser may facilitate live webstreaming and audio recording. You have the option to opt out of inclusion in recordings by contacting ou r Education&\;Training team.\n\n\nCONTACT US for further details about MSc\, PhD\, Post Doc studies\, exchanges and collaboration in education an d training with BSC.\nFor further details about Postgraduate Studies in UP C - Barcelona School of Informatics (FiB)\, visit the website\n\n\n\nSpons ors: BSC and PRACE 6IP project are funding the PATC @ BSC training events. \nIf you want to learn more about PRACE Project\, visit the website.\n\n\n \n \n \n \n \n \n Agenda\n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n 17 March\n 18 March\n \n \n 09.00 - 10.30\n Welcome &\; Introduction (JLG)\n 09.00 - 10.30 \n Simulation DBs an d simulation data management patc.zip (PA)\n \n \n 10.30 - 11 .00 \n Break\n 10.30 - 11.00 \n Break\n \n \n 11.00 - 11.45 \n Atomistic MD Algorithm (JLG)\n 11.00 - 11.45 \n MD a la carte (FC)\n \n \n 11.45 - 12.30 \n Alg orithm improvements &\; HPC (JLG)\n 11.45 - 12.30 \n Introdu ction coarse-grained simulations (PDD)\n \n \n 12.30 - 14.00   \n Break\n 12.30 - 14.00 \n Break\n \n \n 14.00 - 15.30 \n Simulation Setup (FB)\n 14.00 - 15.00 \n Trajectory visualization (AH)\n \n \n 15.30 - 16.30  \n Break\n 15.00 - 16.00 \n Trajectory analysis (AH)\n \n \n 16.30 - 18.00 \n Setup and Analysis Hands On (AH)\n 16.00 - 16.30 \n Break\n \n \n 16.30 - 18.00 \n Survey and Report Writting\n \n \n  \n  \n  \n  \n \n \n  \n JLG: Josep Ll. Gelpi (BSC - IRB - UB )\n \n \n  \n  FC: Francesco Colizzi (IRB)\n  \n \n \n  \n PA: Pau Andrio (BSC)\n  \n \n \n  \n FB: Federica Batistini (IRB - UB)\n \n \n  \n AH: Adam Hospital (IRB)\n  \n \n \n  \n PDD: Pablo Dans (UDELAR - IP - IRB)\n \n \n \n \n  \n  \ n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n   \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n  \n  \n \n \n  \n  \n \n \n  \n  \n \n \n  \n  \n  \n \n \ n  \n  \n \n \n  \n  \n  \n \n \n  \n  \n \n \n  \n  \n  \n  \n \n \n\n\n\nhttps://events.prace-ri.eu/event/ 1139/ SUMMARY:Introduction for Simulation Environments for Life Sciences @ BSC URL;VALUE=URI:https://events.prace-ri.eu/event/1139/ END:VEVENT END:VCALENDAR