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DTSTAMP:20260708T182921Z
UID:93ae539a-1d5b-4d5e-9342-1cc0cc03840b
DTSTART:20190314T080000Z
DTEND:20190315T170000Z
DESCRIPTION:The registration to this course is now open. Please\, bring 
 your own laptop. All the PATC courses at BSC are free of charge.\n\nObjec
 tives: The course will make the attendants familiar with simulation techn
 ologies used in Life Sciences and their specific adaptation to HPC environ
 ment\n\nCourse convener: Josep Gelpi\n\nDetailed outline:\nIntroduction to
  biomolecular simulation\nCoarse-grained and atomistic simulation strategi
 es\nAutomated setup for simulation\n\nHPC specifics: Large scale paralleli
 zation\, use of GPU’s\nStorage and strategies for large scale trajectory
  analysis\n\nLearning Outcomes: Setup\, execute\, and analyze standard sim
 ulations in HPC environment\n\nLevel: (All courses are designed for specia
 lists with at least 1st cycle degree or similar background experience) INT
 ERMEDIATE: for trainees with some theoretical and practical knowledge.\n\n
 Course Program Outline: \n\n\nDay 1\nSession 1\n09.00h – Welcome &amp\; 
 Introduction (JLG)\n10.30h – Break\n11.00h – Atomistic MD Algorithm (J
 LG)\n11.45h –  Algorithm improvements &amp\; HPC (JLG)\n12.30h – Break
 \n\nSession 2\n14.00h – Simulation Setup (FB)\n15.30h – Break\n16.30h 
 – Setup and Analysis Hands On (PA)\n18.00h – Adjourn\n\n--------------
 --------------------------------------------------------------------------
 ----------------\n\nDay 2\nSession 3\n09.00h – Simulation DBs and Data M
 anagement (PA)\n10.30h – Break\n11.00h – Coarse Grained MD (PD)\n12.00
 h – Application Examples (PD)\n13.00h – Break\n\nSession 4\n14.00h –
  Trajectory visualization and analysis (PA)\n16.00h – Break\n16.30h – 
 Report writing (FB\, PA)\n18.00h – End of the course\n\nPD: Pablo Dans (
 IRB-Barcelona)\nPA: Pau Andrio (BSC)\nFB: Federica Battistini (IRB-Barcelo
 na)\n\n\n \n\n \nhttps://events.prace-ri.eu/event/764/
SUMMARY:Introduction for Simulation Environments for Life Sciences @ BSC
URL;VALUE=URI:https://events.prace-ri.eu/event/764/
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