BEGIN:VCALENDAR
VERSION:2.0
PRODID:icalendar-ruby
CALSCALE:GREGORIAN
BEGIN:VEVENT
DTSTAMP:20260710T215601Z
UID:ed273c78-ff9a-4baf-a4bf-a039cc91cd78
DTSTART:20231211T093000Z
DTEND:20231215T173000Z
DESCRIPTION:This comprehensive course equips you with essential skills and 
 knowledge in bacterial genomics analysis\, primarily using Illumina-sequen
 ced samples. You'll gain an understanding of how to select the most approp
 riate analysis workflow\, tailored to the genome diversity of a given bact
 erial species. Through hands-on training\, you'll apply both de novo assem
 bly and reference-based mapping approaches to obtain bacterial genomes for
  your isolates. You will apply standardised workflows for genome assembly 
 and annotation\, including quality assessment criteria to ensure the relia
 bility of your results. Furthermore\, you'll learn how to construct phylog
 enetic trees using whole genome and core genome alignments\, enabling you 
 to explore the evolutionary relationships among bacterial isolates. Lastly
 \, you'll apply methods to detect antimicrobial resistance genes. As examp
 les we will use ''Mycobacterium tuberculosis''\, ''Staphylococcus aureus''
  and ''Streptococcus pneumoniae''\, allowing you to become well-equipped t
 o conduct bacterial genomics analyses on a range of species.\n\n\nIf you d
 o not have a University of Cambridge [Raven account](https://legacy.raven.
 cam.ac.uk/auth/account/) please book or register your interest [here](http
 ://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=4808839&amp\;cours
 e-title=Working%20with%20Bacterial%20Genomes%20in-person).\n\nAdditional i
 nformation\n\n* ♿ The training room is located on the first floor and th
 ere is currently no wheelchair or level access.\n* Our courses are only fr
 ee for registered University of Cambridge students. All other participants
  will be charged according to our  [charging policy](http://www.training.c
 am.ac.uk/bioinformatics/info/charging).\n* Attendance will be taken on all
  courses and a charge is applied for non-attendance\, including for Univer
 sity of Cambridge students. After you have booked a place\, if you are una
 ble to attend any of the live sessions\, please email the [Bioinfo Team](h
 ttps://training.csx.cam.ac.uk/bioinformatics/info/contact).\n* Further det
 ails regarding eligibility criteria are available [here](http://www.traini
 ng.cam.ac.uk/bioinformatics/info/eligibility).
LOCATION:Craik-Marshall Building
SUMMARY:Working with Bacterial Genomes (IN-PERSON)
URL;VALUE=URI:http://training.csx.cam.ac.uk/bioinformatics/event/4808839
END:VEVENT
END:VCALENDAR