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VERSION:2.0
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CALSCALE:GREGORIAN
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DTSTAMP:20260719T122558Z
UID:31f44122-4e29-40a6-9379-4d23e25f033d
DTSTART:20250908T090000Z
DTEND:20250909T170000Z
DESCRIPTION:This two-day training session will provide the basics of protei
 n structure analysis and how this information is stored in databases.On th
 e first day\, we will explore and search in online databases containing pr
 otein structure information including models from AlphaFoldDB. Furthermore
 \, we will visualize protein structures using ChimeraX. Different hands-on
  exercises will allow you to compare the structure of homologues. We will 
 use (online) tools like MutateX on the HPC or PROSS to quantify various in
 teractions in the structures.The second day\, we will explore different me
 thods to access structure predictions\, covering the most relevant online 
 prediction tools (AlphaFold3\, Chai-1) and installations on the HPC at the
  VSC UGhent (AlphaFold2\, Boltz-1\, AlphaPulldown)In the afternoon\, the s
 econd day is dedicated to your own research question you might want to add
 ress via structural predictions with any of the provided tools. Additional
 ly\, we will learn to use AlphaPulldown\, a Python package that streamline
 s protein-protein interaction screens.
LOCATION:Ghent - VIB/UGent FSVM II\, Technologiepark 75
SUMMARY:Introduction to Protein Structure Analysis and Prediction - Septemb
 er 2025 (Ghent)
URL;VALUE=URI:https://training.vib.be/all-trainings/introduction-protein-st
 ructure-analysis-and-prediction-september-2025-ghent
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