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DTSTAMP:20260808T195851Z
UID:1d3375f2-3087-41df-a2d2-6e88d2a42035
DTSTART:20150813T083000Z
DTEND:20150814T153000Z
DESCRIPTION:The aim of this course is to familiarise the participants with 
 the primary analysis of datasets generated through two popular high-throug
 hout sequencing (HTS) assays: ChIP-seq and RNA-seq. This course starts wit
 h a brief introduction to the transition from capillary to high-throughput
  sequencing and discusses quality control issues\, which are common among 
 all NGS datasets. Next\, we will present the alignment step and how it dif
 fers between the two analysis workflows. Finally\, we focus on dataset spe
 cific downstream analysis\, including peak calling and motif analysis for 
 ChIP-seq and quantification of expression\, transcriptome assembly and dif
 ferential expression analysis for RNA-seq. \n\nThe timetable for this even
 t can be found [here.](https://drive.google.com/file/d/0B5BzNXp93Gp5YjdGV3
 JsZEJzOUk/view?usp=sharing)\n\nPlease note that if you are not eligible fo
 r a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/rave
 n/n5) account you will need to Book or register Interest by linking [here]
 (http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Introduction%20to%
 20RNA-seq%20and%20ChIP-seq%20data%20analysis_bioinfo-RNA-seq_13-14.08.2015
 _1483027&amp\;CourseName=Introduction%20to%20RNA-seq%20and%20ChIP-seq%20da
 ta%20analysis&amp\;CourseDate=13-14.08.2015&amp\;CourseDuration=2&amp\;Eve
 ntID=1483027).''
LOCATION:Craik-Marshall Building
SUMMARY:Introduction to RNA-seq and ChIP-seq data analysis
URL;VALUE=URI:http://training.csx.cam.ac.uk/bioinformatics/event/1483027
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