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DTSTAMP:20260710T215556Z
UID:7d25827a-fb87-4a35-bd45-c50bc2463169
DTSTART:20220407T070000Z
DTEND:20220408T100000Z
DESCRIPTION:The aim of the course is to let participants learn how to use N
 AMD to set up basic molecular dynamics simulations\, and to understand typ
 ical NAMD input and output files.\n\nWe will start from scratch by setting
  a MD Biomolecular (protein+water) simulation\, in the first day of the co
 urse. During the second day\, we will learn how to setup a steered molecul
 ar dynamics simulation (Na-Cl system) and use the results to compute the 
 free energies of separation. Regarding the software\, we will use softwar
 e already installed at HPC2N\, i.e. VMD\, and NAMD for the full protocol
 . We will also provide users with a set of best practices to improve the 
 performance of their simulations.\n\nThis course will be two half-days. It
  will have lectures interspersed with live-demo sessions where you get to 
 try out what the instructor shows.\n\nFormat: The course will be two half-
 days and comprises of lectures and hands-on sessions. This is an online-o
 nly course (Zoom)\n\n \n\n\n\n\nDate: 2022-04-(7-8)\nTime: 9:00-12:00 on 
 each day.\nDeadline for registration: 2022-03-31\n\nMore information\, sch
 edule\, and registration can be found on the course webpage at HPC2N\, Ume
 å University.\nhttps://events.prace-ri.eu/event/1385/
SUMMARY:[ONLINE] MD simulations with a focus on NAMD @ SNIC
URL;VALUE=URI:https://events.prace-ri.eu/event/1385/
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