BEGIN:VCALENDAR VERSION:2.0 PRODID:icalendar-ruby CALSCALE:GREGORIAN BEGIN:VEVENT DTSTAMP:20260808T182327Z UID:4a1a7e6a-0228-44ac-8725-cdcb7cb2715b DTSTART:20150511T083000Z DTEND:20150513T150000Z DESCRIPTION:Jalview hands-on training course is for anyone who works with s equence data and multiple sequence alignments from proteins\, RNA and DNA. \n\n[Jalview](http://www.jalview.org) is free software for protein and nuc leic acid sequence alignment generation\, visualisation and analysis. It i ncludes sophisticated editing options and provides a range of analysis too ls to investigate the structure and function of macromolecules through a m ultiple window interface. For example\, Jalview supports 8 popular methods for multiple sequence alignment\, prediction of protein secondary structu re by [JPred](http://www.compbio.dundee.ac.uk/jpred4) and disorder predict ion by four methods. Jalview also has options to generate phylogenetic tr ees\, and assess consensus and conservation across sequence families. Sequ ences\, alignments and additional annotation can be accessed directly from public databases and journal-quality figures generated for publication.\n \nThe course involves of a mixture of talks and hands-on exercises.\n\nDay 1 is an introduction to protein multiple sequence alignment editing and a nalysis with Jalview.\n\nDay 2 focuses on using Jalview for RNA sequence a nalysis\, and also integrating cDNA and protein analysis and covers more a dvanced applications after lunch.\n\nDay 3 concentrates on protein seconda ry structure prediction with JPred version 4 as well as protein sub-family analysis to identify functionally important residues.\n\nThere will be op portunities for attendees to get advice on analysis of their own sequence families.\n\nFurther information\, including some training videos\, is als o [available](http://www.jalview.org//training/training-courses/Protein-an d-RNA-multiple-sequence-alignment-protein-secondary-structure).\n\n\n\nPle ase note that if you are not eligible for a University of Cambridge [Raven ](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to boo k by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID =Protein%20and%20RNA%20multiple%20sequence%20alignment%20and%20functional% 20analysis%20with%20Jalview_gsls-jalview_2015.05.11-13_1442887&\;Course Name=Protein%20and%20RNA%20multiple%20sequence%20alignment%20and%20functio nal%20analysis%20with%20Jalview&\;CourseDate=2015.05.11-13&\;CourseD uration=3&\;EventID=1442887).'' LOCATION:Craik-Marshall Building SUMMARY:Protein and RNA multiple sequence alignment\, protein secondary str ucture prediction\, trees\, sub-family and function analysis with Jalview URL;VALUE=URI:http://training.csx.cam.ac.uk/bioinformatics/event/1442887 END:VEVENT END:VCALENDAR