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VERSION:2.0
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DTSTAMP:20260808T230056Z
UID:b5e9bd68-423c-490b-9824-dc0270a6eb4f
DTSTART:20190212T093000Z
DTEND:20190225T170000Z
DESCRIPTION:b'You will execute a complete analysis workflow in GenePattern\
 , Galaxy or command line and R to detect differential expression between 
 two conditions\n\\r\n\n We\\'ll go through the different steps of the work
 flow:\\r\n\n \nQuality control of the sequence reads to detect biases or c
 ontaminating adapters.\\r\nMapping of the reads to the reference genome w
 ith use of a transcript database model.\\r\nQuality control  of the mapp
 ing results.\\r\nAdjusting the mapping data to compensate for artefacts l
 ike duplicates.\\r\nCalculate transcript counts usable for differential ex
 pression and merging of count tables \n\\r\nComputing differential expr
 ession using  DESeq2.\n\\r\n\n • fastQC • trimmomatic• Groomer 
 • STAR• samtools• Picard • RSeQC• HTSeq• R - RStudio - Biocon
 ductor - various packages \n\\r\n\n  \\r\nFamiliarity with \n \nRNA-seq
  assembly\\r\nRNA-seq analysis for isoform detection\\r\nRNA-seq analysis 
 for detection of short RNA species\n\\r\n\n \n.Organised by the VIB Bioinf
 ormatics Core​\n\\r\n​\n'
LOCATION:Park Inn by Radisson Leuven
SUMMARY:RNA-Seq analysis for differential expression\, extra session
URL;VALUE=URI:http://www.vib.be/en/training/research-training/courses/Pages
 /RNA-Seq-analysis-for-differential-expression,-extra-session.aspx
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