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VERSION:2.0
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DTSTAMP:20260710T175652Z
UID:ceb0f3d7-b4c9-43ac-98ed-8f7773ae52a3
DTSTART:20170314T080000Z
DTEND:20170315T170000Z
DESCRIPTION:The registration to this course is closed. Please\, bring your
  own laptop. All the PATC courses at BSC are free of charge.\n\nObjective
 s: The course will make the attendants familiar with simulation technolog
 ies used in Life Sciences and their specific adaptation to HPC environment
 \n\nCourse convener: Josep Gelpi\n\nDetailed outline:\nIntroduction to bio
 molecular simulation\nCoarse-grained and atomistic simulation strategies\n
 Automated setup for simulation\n\nHPC specifics: Large scale parallelizati
 on\, use of GPU’s\nStorage and strategies for large scale trajectory ana
 lysis\n\nLearning Outcomes: Setup\, execute\, and analyze standard simulat
 ions in HPC environment\n\nLevel: (All courses are designed for specialist
 s with at least 1st cycle degree or similar background experience) INTERME
 DIATE: for trainees with some theoretical and practical knowledge.\n\nCour
 se Program Outline: \n\nDay 1 \n\nSession 1\n09.00h – Welcome &amp\; Int
 roduction (JLG)\n10.30h – Break\n11.00h – Atomistic MD Algorithm (JLG)
 \n11.45h –  Algorithm improvements &amp\; HPC (JLG)\n12.30h – Break\n
 \nSession 2\n14.00h – Simulation Setup (AH)\n15.00h – Setup and Analys
 is Hands On (AH)\n16.00h – Break\n16.30h – Setup and Analysis Hands On
  (AH)  \n18.00h – Adjourn\n\n------------------------------------------
 --------------------------------------------------------------\n\nDay 2 \n
 Session 3\n09.00h – Simulation DBs (MoDEL) (RG)\n10.00h – Simulation D
 ata Management (PA)\n10.30h – Break\n11.00h – Coarse Grained MD (AE)\n
 12.00h – Application Examples (MO)\n13.00h – Break\n\nSession 4\n14.00
 h – Coarse Grained MD manual slides Hands on (AE)\n16.00h – Break\n16.
 30h – Free  Hands-on\n18.00h – End of the course\n\nAE: Agustí Emper
 ador (IRB) \, AH: Adam Hospital (IRB)\, JLG: Josep Ll. Gelpi (BSC-IRB- UB)
 \, MO: Modesto Orozco (BSC-IRB-UB)\, PA: Pau Andrio (BSC)\, RG: Ramón Go
 ñi (BSC)\n\n \n\nhttps://events.prace-ri.eu/event/537/
SUMMARY:Simulation Environments for Life Sciences @ BSC
URL;VALUE=URI:https://events.prace-ri.eu/event/537/
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