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DTSTAMP:20260616T135820Z
UID:f59b9923-1575-4b9a-8b6c-73a90a4a9b4d
DTSTART:20251117T220000Z
DTEND:20251119T060000Z
DESCRIPTION:Outgrown your laptop? Learn how to take your bioinformatics pip
 elines to the next level by scaling them on Australia’s national high pe
 rformance computing (HPC) clusters.\n\nIn collaboration with the National 
 Computational Infrastructure (NCI) and the Pawsey Supercomputing Research 
 Centre\, this hands-on workshop will equip you with the practical skills t
 o run and optimise efficient Nextflow workflows on HPC systems.\n\nAttende
 es will be guided through a series of hands-on exercises to configure nf-c
 ore workflows on NCI Gadi (PBS) and Pawsey Setonix (SLURM)\, and will iter
 atively develop a bioinformatics workflow to process larger files\, and mo
 re samples.\n\n**Lead Trainers**:\n- *Dr Michael Geaghan*\, Senior Bioinfo
 rmatician (Australian BioCommons)\, Sydney Informatics Hub (SIH)\, Univers
 ity of Sydney\n- *Fred Jaya*\, Senior Bioinformatician (Australian BioComm
 ons)\, Sydney Informatics Hub (SIH)\, University of Sydney\n\n**Date/Time*
 *: 1\n8-19 November 2025\, 1 - 4 pm AEDT /12:30 - 3:30 pm ACDT / 11 - 2 pm
  AWST \n\n**Format**:\nThis online workshop will take place over two sessi
 ons of three hours each. You must attend both sessions in order to get the
  most out of the workshop. Expert trainers will introduce new topics and g
 uide you through hands-on activities to help you put your new skills into 
 action.\n\n**Who the workshop is for**\n\nThis workshop is for Australian 
 researchers and technical users (bioinformaticians\, life scientists\, and
  data scientists) who:\n\n- Have access to HPC systems (e.g.\, institution
 al\, national\, or cloud-based clusters)\n- Have run simple Nextflow pipel
 ines\, typically in a one-sample-per-run or manual scripting context\n- Ar
 e now looking to scale up their workflows\, optimise performance\, and app
 ly best practices for HPC environments\n\nYou must be associated with an A
 ustralian organisation for your application to be considered. Please note 
 that participants will be supported with access to Gadi and Setonix comput
 ing resources for the duration of this workshop. \n\n**[Apply here](https:
 //www.eventbrite.com.au/e/nextflow-on-hpc-tickets-1698529981899?aff=oddtdt
 creator)**\n\nThis workshop is free but participation is subject to applic
 ation with selection. \n\nApplications close at **11:59 pm AEDT\, Monday 3
  November 2025**.\n\nApplications will be reviewed by the organising commi
 ttee and all applicants will be informed of the status of their applicatio
 n (successful\, waiting list\, unsuccessful). Successful applicants will b
 e provided with a Zoom meeting link closer to the date. More information o
 n the selection process is provided in our [Advice on applying for Austral
 ian BioCommons workshops](https://www.biocommons.org.au/workshop-applicati
 ons).\n\nThis workshop is presented by [Australian BioCommons](https://www
 .biocommons.org.au/) with the assistance of a network of facilitators from
  the [National Bioinformatics Training Cooperative](https://www.biocommons
 .org.au/training-cooperative). It is underpinned by computational resource
 s provided by NCI and Pawsey Supercomputing Research Centre.\n\nThis event
  is part of a series of [bioinformatics training events](https://www.bioco
 mmons.org.au/webinars-workshops). If you'd like to hear when registrations
  open for other events\, please subscribe to the [Australian BioCommons ne
 wsletter](https://www.biocommons.org.au/subscribe).
SUMMARY:WORKSHOP: Nextflow on HPC
URL;VALUE=URI:https://www.biocommons.org.au/events/nextflow-hpc-workshop-20
 25
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