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- European Bioinformatics Institute (EBI)2
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- Workshops and courses2
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Target audience
- This course is aimed at scientists working with bioimage data across the life sciences. It is suitable for those involved in creating bioimages or taking their first steps in analysis. The content would also be suitable for those wanting to learn more about the BioImage Archive and gain experience with machine learning approaches for image analysis. The programme will be of particular interest to bio-image analysts with questions relating to the use of ‘big data’ and using the wealth of publically available data curated in the BioImageArchive. The course should be accessible to members of the bioimaging community and does not require prior experience with machine learning methods or use of the BioImage Archive is necessary, but applicants are encouraged to explore the resources below before starting their application. Applicants should be comfortable with basic programming tasks and have experience working with Python. Prerequisite reading: Nature: BioImage Archive: A call for public archives for biological image data biorxiv: ZeroCostDL4Mic: an open platform to simplify access and use of Deep-Learning in Microscopy Nucleic Acids Research: The BioStudies database—one stop shop for all data supporting a life sciences study Nature Methods: EMPIAR: a public archive for raw electron microscopy image data Nature: Image Data Resource: a bioimage data integration and publication platform BioModelZoo1
- This course is aimed at scientists working with biomage data across the life sciences. It is suitable for those involved in creating bioimages or taking their first steps in analysis. The content would also be suitable for those wanting to learn more about the BioImage Archive and gain experience with machine learning approaches for image analysis. The programme will be of particular interest to bioimage analysts with questions relating to the use of ‘big data’ and using the wealth of publically available data curated in the BioImage Archive. The course should be accessible to members of the bioimaging community and does not require prior experience with machine learning methods or use of the BioImage Archive. Applicants are encouraged to explore the resources below before starting their application. Applicants should be comfortable with basic programming tasks and have experience working with Python. Prerequisite reading: BioImage Archive: A call for public archives for biological image data ZeroCostDL4Mic: an open platform to simplify access and use of Deep-Learning in Microscopy The BioStudies database - one stop shop for all data supporting a life sciences study EMPIAR: a public archive for raw electron microscopy image data Image Data Resource: a bioimage data integration and publication platform BioImage Model Zoo 1
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Instructor
- Janick Mathys146
- Bruna Piereck73
- Alexander Botzki68
- Wandrille Duchemin59
- Matheus Lourenço51
- True Colours48
- Christof De Bo45
- Benjamin Pavie39
- Elien Vandermarliere34
- Lieve Ongena34
- Geert van Geest33
- Aleena Mushtaq29
- Robin Engler29
- René Custers23
- Agnes Uhereczky21
- Gert Van Isterdael20
- Lucia Smit20
- Amanda Gonçalves19
- Joris De Wolf19
- Benjamin Moore18
- Niels Vandamme18
- David Armstrong17
- Deepak Tanwar17
- Liesbeth De Milde17
- Michal Szpak17
- Nancy George17
- Robin Lefebvre17
- Birgit Meldal15
- James Collier15
- Kobe Lavaerts14
- Sarah Morgan14
- Sebastian Munck14
- Tom Hancocks14
- Wendi Bacon14
- Alexandra Holinski13
- Barbara Baert13
- Baron Koylass13
- Emily Perry13
- Anna Swan12
- Dayane Rodrigues Araujo12
- Nicolas Vannieuwkerke12
- Ricard Argelaguet12
- Sam Holt12
- Tania Wyss Lozano12
- Tatiana Woller12
- David Wishart11
- Jolan Heyse11
- Kalpana Panneerselvam11
- Lee Larcombe11
- Niels Geudens11
- Alex Bateman10
- Alexandre Bonvin10
- An Staes10
- Frédéric Burdet10
- Gustavo Ruiz Buendia10
- Krishna Kumar Tiwari10
- Lorna Richardson10
- Malachi Griffith10
- Rossana Zaru10
- Thuong Van Du Tran10
- Veronique Voisin10
- Bob Asselbergh9
- Gary Bader9
- Lennart Martens9
- Lieven Clement9
- Louisse Paola Mirabueno9
- Mathieu Bourgey9
- Obi Griffith9
- Osman Salih9
- Rahuman Sheriff9
- Silvie Fexova9
- Tallulah Andrews9
- Thawfeek Mohamed Varusai9
- Typhaine Paysan-Lafosse9
- Ajay Mishra8
- Alexey Larionov8
- Andrew Hercules8
- Bart Mesuere8
- Ben Verhoeven8
- Cath Brooksbank8
- Eliot Ragueneau8
- Evelien Van Hamme8
- Fabio Madeira8
- Frank Vernaillen8
- Geert Vermaerke8
- Hema Bye-A-Jee8
- Jared Simpson8
- Jean-luc Doumont8
- Koen Van den Eeckhout8
- Nicolas Peredo8
- Pavankumar Videm8
- Rachel Marcone8
- Tania Wyss8
- Trevor Pugh8
- Alyona Ivanova7
- Arne Defauw7
- Bart Ghesquière7
- Delphi Van Haver7
- Emily Bowler-Barnett7
- Engy Nasr7
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