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- European Bioinformatics Institute (EBI)22
- iAnn21
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Target audience
- The workshop is aimed at biologists and computer scientists in Latin American countries only (excluding Chile and Uruguay due to funding restrictions) wanting to learn the basics of network analysis and biological data cure for clinically relevant pathogens. Trainees should be undertaking research at postgraduate-level upwards focusing on infectious diseases. No previous experience using interaction data resources is needed. Please note this course will be taught in English, however the trainers are fluent in either Spanish/Portuguese, and can offer language support where feasible. Priority will also be given to those who have not attended the CABANA event yet. Researchers who apply for CABANA courses should have projects in one or more of the CABANA challenge areas (sustainable crop production, communicable diseases, protection of biodiversity). Scientists from underrepresented ethnic and gender groups are especially encouraged to apply for this workshop, for example women and those with Black and/or Indigenous heritage. Prerequisites Participants will require a basic knowledge of the Unix command line, and the R statistical packages. We recommend these free tutorials: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Linux: https://training.linuxfoundation.org/free-linux-training Basic R concept tutorials: www.r-tutor.com/r-introduction1
- The workshop is aimed at biologists and computer scientists wanting to learn the basics of network analysis and biological data curation for clinically relevant pathogens. Trainees should be undertaking research at postgraduate-level upwards focusing on infectious diseases. No previous experience using interaction data resources is needed. Please note this course will be taught in English, however the trainers are fluent in either Spanish/Portuguese, and can offer language support where feasible. Priority will also be given to those who have not attended a CABANA event yet. Travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form. Up to 30% of workshop delegates can be awarded fellowships and these are normally awarded by reimbursement after the event. Prerequisites Participants will require a basic knowledge of the Unix command line, and the R statistical packages. We recommend these free tutorials: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Linux: https://training.linuxfoundation.org/free-linux-training Basic R concept tutorials: www.r-tutor.com/r-introduction1
- This course is intended for graduate students, postdocs and young researchers working in the fields of metagenomics and viral discovery in the CABANA grand challenge areas of communicable diseases, protection of biodiversity, and/or sustainable crop production. Applicants must be employed within Latin America only. Additional we cannot accept applications from Chile or Uruguay due to funding restrictions. Prerequisites Please note this course will be taught in English, however the trainers are fluent in either Spanish/Portuguese, and can offer language support where feasible. Priority will also be given to those who have not attended a CABANA event yet. Students should be familiar with using the Linux command line. As the course will be held remotely, all students must have Zoom previously installed on their computers. Also, as classes will be held synchronously, a good Internet connection is mandatory. A knowledge of virology, especially from previous research experience, is also desirable. Scientists from underrepresented ethnic and gender groups are especially encouraged to apply for this workshop, for example women and those with Black and/or Indigenous heritage. 1
- This course is intended for new and experienced managers of bioinformatics core facilities, or other facilities that support their users to analyse and interpret large biomolecular data sets. This course will not provide a platform for teaching hands-on bioinformatics analysis. Prerequisites Please note this course will be taught in English, however some trainers are fluent in either Spanish/Portuguese, and can offer language support where feasible. Priority will also be given to those who have not attended a CABANA event yet. A number of travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form. Due to funding restrictions we are unable to award fellowships to those employed in Chile and Uruguay.1
- This is a two-day interactive workshop which will be delivered in English. Applications are open for researchers based in ITV only. Selection criteria: There are a number of criteria upon which selection of participants for this workshop will be made. Candidates should be able to demonstrate: They are at postdoctoral level OR have several years of research experience They are working in a Latin American institution and are likely to remain in the institution for the next year or more They are actively involved in a research project and actively using bioinformatics tools / methods They have a strong interest in training and have been involved in some training prior to joining the course They have identified a need / gap where training could be provided, and have thought about potential training they would like to deliver. The ideal candidate will have 3+ years of research experience which includes a bioinformatics component, and a strong interest in developing or delivering bioinformatics training. You do NOT have to be a bioinformatician to apply.1
- This symposium is aimed at a broad audience. We will welcome researchers from postgraduate level upwards who conduct biodiversity studies and are interested in initiating or boosting molecular and computational approaches to their work. We also welcome participation from those in industry, government, funding agencies or other stakeholders interested in establishing projects or programs on the use of molecular tools for biodiversity assessment, monitoring or species identification. The symposium will present a higher level view of the topic. Specific molecular or computational skills are not necessary. However, a general understanding of molecular approaches will be very useful, as will an understanding of current practices for biodiversity assessment. Please note this symposium will be in English, however, the speakers may be fluent in either Spanish/Portuguese, and can offer language support where feasible. A number of travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form. 1
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Instructor
- Adrian Turjanski2
- Artur Trancoso Lopo de Queiroz2
- Dario Fernández Do Porto2
- Guilherme Oliveira2
- Henning Hermjakob2
- Julieth Irene Murillo Silva2
- Pablo Ivan Pereira Ramos2
- Suzanne Paley2
- Agustin Pardo1
- Ana Tereza Ribeiro de Vasconcelos1
- Andre Fujita1
- Andrew Hercules1
- Antonio Marinho da Silva Neto1
- Arthur Gruber1
- Cath Brooksbank1
- Claudio Oliveira1
- Darío Lijtmaer1
- Ernesto Perez-Rueda1
- Fabrício Santos1
- Felipe Naveca1
- Guillermo Rangel-Pineros1
- Helder Nakaya1
- Hugo de Boer1
- Jonathan Ready1
- Kiyoshi Fukutani1
- Liliane S. Oliveira Kashiwabara1
- Markus Krummenacker 1
- Nadim Mahdi Rahman1
- Nicole Scherer1
- Pablo Lavinia1
- Paul Flicek1
- Paul Hebert1
- Peter Hollingsworth1
- Peter Karp1
- Piraveen Gopalasingam1
- Piv Gopalasingam1
- Renato Oliveira1
- Robson Francisco de Souza1
- Ronnie Alves1
- Santelmo Vasconcelos1
- Steven Newhouse1
- Thiago Parente1
- Tulio de Lima Campos1
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