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Content provider
- European Bioinformatics Institute (EBI)2
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Scientific topic
- Agricultural biotechnology1
- Agricultural economics1
- Agricultural science1
- Animal breeding1
- Animal husbandry1
- Animal nutrition1
- Farming systems research1
- Food process engineering1
- Food security1
- Genotyping1
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- Plant breeding1
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Event type
- Workshops and courses2
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Country
- Costa Rica2
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Target audience
- This course is aimed at wet-lab researchers at within Latin America undertaking plant breeding and population genetics interested in applying next-generation sequencing to screen individuals. Please note this course will be taught in English, however the trainers are fluent in either Spanish or Portuguese, and can offer language support where feasible. A number of travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form. Knowledge in UNIX and NGS technologies is required. Therefore, these free resources should be studied beforehand: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Linux: https://training.linuxfoundation.org/free-linux-training Basic R concept tutorials: www.r-tutor.com/r-introduction You may also find this video overview of GBS useful.1
- This course is aimed at wet-lab researchers within Latin America (excluding Chile and Uruguay due to funding restrictions) who are working with and/or generating their own crop genomic data or who are working on genotyping technologies, including data analysis software development. Researchers who apply for CABANA courses should have projects in one or more of the CABANA challenge areas (sustainable crop production, communicable diseases, protection of biodiversity). Please note this course will be taught in English, however some trainers are fluent in either Spanish/Portuguese, and can offer language support where feasible. Priority will also be given to those who have not attended a CABANA event yet. Scientists from underrepresented ethnic and gender groups are especially encouraged to apply for this workshop, for example women and those with Black and/or Indigenous heritage. Prerequisites: basic computational or previous bioinformatics experience is required for this workshop, such as basic commands in R. Undergraduate-level knowledge of plant biology would be an advantage. Please note: The course will use genomic data from crop plant species throughout the week. It will not explore in detail methods for assembling genomes.1
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Instructor
- Janick Mathys147
- Bruna Piereck73
- Alexander Botzki68
- Wandrille Duchemin59
- Matheus Lourenço52
- True Colours48
- Christof De Bo45
- Benjamin Pavie39
- Elien Vandermarliere34
- Lieve Ongena34
- Geert van Geest33
- Aleena Mushtaq29
- Robin Engler29
- René Custers23
- Agnes Uhereczky21
- Gert Van Isterdael20
- Lucia Smit20
- Amanda Gonçalves19
- Joris De Wolf19
- Benjamin Moore18
- Niels Vandamme18
- David Armstrong17
- Deepak Tanwar17
- Liesbeth De Milde17
- Michal Szpak17
- Nancy George17
- Robin Lefebvre17
- Birgit Meldal15
- James Collier15
- Kobe Lavaerts14
- Sarah Morgan14
- Sebastian Munck14
- Tom Hancocks14
- Wendi Bacon14
- Alexandra Holinski13
- Barbara Baert13
- Baron Koylass13
- Emily Perry13
- Anna Swan12
- Dayane Rodrigues Araujo12
- Nicolas Vannieuwkerke12
- Niels Geudens12
- Ricard Argelaguet12
- Sam Holt12
- Tania Wyss Lozano12
- Tatiana Woller12
- David Wishart11
- Jolan Heyse11
- Kalpana Panneerselvam11
- Lee Larcombe11
- Alex Bateman10
- Alexandre Bonvin10
- An Staes10
- Frédéric Burdet10
- Gustavo Ruiz Buendia10
- Krishna Kumar Tiwari10
- Lorna Richardson10
- Malachi Griffith10
- Rossana Zaru10
- Thuong Van Du Tran10
- Veronique Voisin10
- Bob Asselbergh9
- Gary Bader9
- Lennart Martens9
- Lieven Clement9
- Louisse Paola Mirabueno9
- Mathieu Bourgey9
- Obi Griffith9
- Osman Salih9
- Rahuman Sheriff9
- Silvie Fexova9
- Tallulah Andrews9
- Thawfeek Mohamed Varusai9
- Typhaine Paysan-Lafosse9
- Ajay Mishra8
- Alexey Larionov8
- Andrew Hercules8
- Bart Mesuere8
- Ben Verhoeven8
- Cath Brooksbank8
- Eliot Ragueneau8
- Evelien Van Hamme8
- Fabio Madeira8
- Frank Vernaillen8
- Geert Vermaerke8
- Hema Bye-A-Jee8
- Jared Simpson8
- Jean-luc Doumont8
- Koen Van den Eeckhout8
- Nicolas Peredo8
- Pavankumar Videm8
- Rachel Marcone8
- Tania Wyss8
- Trevor Pugh8
- Alyona Ivanova7
- Arne Defauw7
- Bart Ghesquière7
- Delphi Van Haver7
- Emily Bowler-Barnett7
- Engy Nasr7
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