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- European Bioinformatics Institute (EBI)2
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Keyword
- CABANA1
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Scientific topic
- Virology2
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Event type
- Workshops and courses2
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Country
- Costa Rica1
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Target audience
- This course is aimed at wet-lab researchers at any career stage within Latin America undertaking pathogen population genetics and surveillance, interested in applying next generation sequencing to virus identification. Those working in plant protection organizations and/or academia are welcome to apply, and priority will be given to those who have not yet attended a CABANA workshop. Please note this course will be taught in English, however the trainers are fluent in Spanish, and can offer language support where feasible. A number of travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form. Priority will be given to those who have not previously been awarded a CABANA fellowship. Knowledge in R and NGS technologies is required. Therefore, these free resources should be studied beforehand: Basic R concept tutorials: www.r-tutor.com/r-introduction https://r4ds.had.co.nz/tidy-data.html Learning outcomes1
- This course is suitable for postgraduate (MSc-level and above) scientists within Latin America (excluding Chile and Uruguay) who are working with or generating genomic datasets related to SARS-CoV-2. Ideally, trainees will be working in the field of virology, and performing sequencing and/or analysing viral sequences, especially those within the coronaviridae family. We welcome applications from universities, research centres, hospitals, public health, and private laboratories. Scientists from underrepresented ethnic and gender groups are especially encouraged to apply for this workshop. Please note this course will be taught in English, however the trainers are fluent in either Spanish or Portuguese and can offer language support where feasible. Attendance priority will be given to those who have not attended a CABANA event yet. Prerequisites Undergraduate-level knowledge of biology would be advantageous. You will also require access to a computer for the duration of the workshop. While most practicals are browser-based, a few will require a UNIX environment. Trainees will therefore require a basic knowledge of the Unix command line. We recommend these free tutorials: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Linux: https://training.linuxfoundation.org/free-linux-training Training will be delivered via Zoom; trainees need to ensure they have working audio and microphones.1
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Instructor
- Janick Mathys143
- Bruna Piereck72
- Alexander Botzki67
- Wandrille Duchemin57
- True Colours48
- Christof De Bo45
- Matheus Lourenço42
- Benjamin Pavie38
- Elien Vandermarliere34
- Lieve Ongena34
- Geert van Geest33
- Aleena Mushtaq29
- Robin Engler29
- René Custers23
- Amanda Gonçalves19
- Benjamin Moore18
- Gert Van Isterdael18
- Joris De Wolf18
- Niels Vandamme18
- Agnes Uhereczky17
- David Armstrong17
- Liesbeth De Milde17
- Michal Szpak17
- Nancy George17
- Robin Lefebvre17
- Deepak Tanwar16
- Lucia Smit16
- Birgit Meldal15
- James Collier14
- Kobe Lavaerts14
- Sarah Morgan14
- Tom Hancocks14
- Wendi Bacon14
- Alexandra Holinski13
- Baron Koylass13
- Emily Perry13
- Sebastian Munck13
- Anna Swan12
- Dayane Rodrigues Araujo12
- Sam Holt12
- Tania Wyss Lozano12
- Tatiana Woller12
- David Wishart11
- Kalpana Panneerselvam11
- Lee Larcombe11
- Nicolas Vannieuwkerke11
- Ricard Argelaguet11
- Alex Bateman10
- Alexandre Bonvin10
- Barbara Baert10
- Gustavo Ruiz Buendia10
- Krishna Kumar Tiwari10
- Lorna Richardson10
- Malachi Griffith10
- Niels Geudens10
- Rossana Zaru10
- Veronique Voisin10
- An Staes9
- Bob Asselbergh9
- Frédéric Burdet9
- Gary Bader9
- Jolan Heyse9
- Lennart Martens9
- Lieven Clement9
- Louisse Paola Mirabueno9
- Mathieu Bourgey9
- Obi Griffith9
- Osman Salih9
- Rahuman Sheriff9
- Silvie Fexova9
- Tallulah Andrews9
- Thawfeek Mohamed Varusai9
- Thuong Van Du Tran9
- Typhaine Paysan-Lafosse9
- Ajay Mishra8
- Alexey Larionov8
- Andrew Hercules8
- Bart Mesuere8
- Ben Verhoeven8
- Cath Brooksbank8
- Eliot Ragueneau8
- Fabio Madeira8
- Frank Vernaillen8
- Geert Vermaerke8
- Hema Bye-A-Jee8
- Jared Simpson8
- Jean-luc Doumont8
- Koen Van den Eeckhout8
- Nicolas Peredo8
- Pavankumar Videm8
- Rachel Marcone8
- Tania Wyss8
- Trevor Pugh8
- Alyona Ivanova7
- Arne Defauw7
- Bart Ghesquière7
- Emily Bowler-Barnett7
- Engy Nasr7
- Evelien Van Hamme7
- Gerard Kleywegt7
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