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Content provider
- European Bioinformatics Institute (EBI)8
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Keyword
- IntAct Molecular Interaction Database4
- Proteins (proteins)3
- Reactome pathways database3
- AlphaFold Database2
- InterPro2
- UniProt: The Universal Protein Resource2
- protein annotation2
- protein function2
- BioModels database1
- Complex Portal1
- Electron Microscopy Data Bank1
- Electron Microscopy Public Image Archive - EMPIAR1
- Ensembl1
- HMMER - protein homology search1
- Mass spectrometry1
- PRIDE: The Proteomics Identifications Database1
- Pfam1
- Protein Data Bank in Europe1
- Protein Data Bank in Europe - Knowledge Base1
- Protein annotation1
- Protein classification1
- Protein function1
- Quantitative proteomics1
- Reactome Pathways Analysis1
- Structures (structures)1
- Systems (systems)1
- electron density map1
- mass spectrometry1
- protein sequence classification1
- protein structure1
- quantitative proteomics1
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Scientific topic
- Amino acid sequence4
- Amino acid sequences4
- Protein sequence4
- Protein sequences4
- 2D PAGE experiment2
- Bottom-up proteomics2
- DIA2
- Data-independent acquisition2
- Discovery proteomics2
- MS2
- MS experiments2
- MS-based targeted proteomics2
- MS-based untargeted proteomics2
- Mass spectrometry2
- Mass spectrometry experiments2
- Metaproteomics2
- Northern blot experiment2
- Peptide identification2
- Protein and peptide identification2
- Proteomics2
- Proteomics experiment2
- Quantitative proteomics2
- Spectrum demultiplexing2
- Targeted proteomics2
- Top-down proteomics2
- Biological models1
- Biological networks1
- Biological pathway analysis1
- Biological pathway modelling1
- Biological pathway prediction1
- Biological pathways1
- Cellular process pathways1
- Computational immunology1
- Disease pathways1
- Environmental information processing pathways1
- Functional pathway analysis1
- Gene and protein families1
- Gene families1
- Gene family1
- Gene regulatory networks1
- Gene system1
- Genes, gene family or system1
- Genetic information processing pathways1
- Immunoinformatics1
- Immunology1
- Interactions1
- Interactome1
- Metabolic pathways1
- Molecular interactions1
- Molecular interactions, pathways and networks1
- Networks1
- Pathway analysis1
- Pathway comparison1
- Pathway modelling1
- Pathway prediction1
- Pathway simulation1
- Pathways1
- Protein complex1
- Protein families1
- Protein sequence classification1
- Protein structure1
- Protein structures1
- Signal transduction pathways1
- Signaling pathways1
- Structure analysis1
- protein1
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Event type
- Workshops and courses8
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Country
- United Kingdom5
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Target audience
- The course is aimed at individuals working in immunology research who have minimal experience in bioinformatics. Applicants are expected to be at an early stage of using bioinformatics in their research with the need to develop their skills and knowledge further. Participants will need a basic knowledge of the Unix command line, and the R statistical package. We recommend these free tutorials: Introduction to the Unix environment – http://www.ee.surrey.ac.uk/Teaching/Unix/ Basic R concepts – http://www.r-tutor.com/r-introduction1
- The course is aimed at research scientists with a minimum of a degree in a biological discipline, including laboratory and clinical staff, as well as specialists in related fields. The practical elements of the course will take raw data from a proteomics experiment and analyse it. Participants will be able to go from MS spectra to identifying and quantifying peptides, and finally to obtaining lists of protein identifiers that can be analysed further using a wide range of resources. The final aim is to provide attendees with the practical bioinformatics knowledge they need to go back to the lab and process their own data when collected.1
- This course is aimed at anyone interested in finding out more about protein biology. No prior experience of bioinformatics is required, but participants should have an undergraduate level understanding of biology. For those who wish to attend the sessions on programmatic access, prior knowledge of coding/programming would be of benefit. For an introduction to the concept of web services and how you can use them to access the tools and data available programmatically, please watch this EMBL-EBI, programatically webinar.1
- This course is aimed at experimental biologists, bioinformaticians and mathematicians who have just started in systems biology, are familiar with the basic terminology in this field and who are now keen on gaining a better knowledge of systems biology modelling approaches to understand biological and biomedical problems. An experience of using a programming language (e.g Python, R, Matlab) would be a benefit but is not mandatory. An undergraduate knowledge of molecular and cellular biology or some background in mathematics is highly beneficial.1
- This course is aimed at life science researchers wanting to learn more about processing RNA-seq data and later downstream analysis. It will help those wanting a basic introduction to handling RNA-seq data, guiding them through several common approaches that can be applied to their own datasets. It features taught and practical sessions that cover how to interpret gene expression data and learn more about the biological significance of certain results. Participants will require a basic knowledge of the Unix command line, the Ubuntu 18 operating system, and the R statistical packages. We recommend these free tutorials: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Linux: https://training.linuxfoundation.org/free-linux-training Basic R concept tutorials: www.r-tutor.com/r-introduction Regardless of your current knowledge, we encourage successful participants to use these, and other materials, to prepare for attending the course and future work in this area.1
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Instructor
- Eliot Ragueneau
- Janick Mathys144
- Bruna Piereck74
- Alexander Botzki68
- Wandrille Duchemin59
- Matheus Lourenço51
- True Colours48
- Christof De Bo45
- Benjamin Pavie39
- Elien Vandermarliere34
- Lieve Ongena34
- Geert van Geest33
- Aleena Mushtaq29
- Robin Engler29
- René Custers23
- Agnes Uhereczky21
- Gert Van Isterdael20
- Lucia Smit20
- Amanda Gonçalves19
- Benjamin Moore18
- Joris De Wolf18
- Niels Vandamme18
- David Armstrong17
- Deepak Tanwar17
- Liesbeth De Milde17
- Michal Szpak17
- Nancy George17
- Robin Lefebvre17
- Birgit Meldal15
- James Collier14
- Kobe Lavaerts14
- Sarah Morgan14
- Sebastian Munck14
- Tom Hancocks14
- Wendi Bacon14
- Alexandra Holinski13
- Barbara Baert13
- Baron Koylass13
- Emily Perry13
- Tatiana Woller13
- Anna Swan12
- Dayane Rodrigues Araujo12
- Nicolas Vannieuwkerke12
- Ricard Argelaguet12
- Sam Holt12
- Tania Wyss Lozano12
- David Wishart11
- Jolan Heyse11
- Kalpana Panneerselvam11
- Lee Larcombe11
- Niels Geudens11
- Alex Bateman10
- Alexandre Bonvin10
- An Staes10
- Frédéric Burdet10
- Gustavo Ruiz Buendia10
- Krishna Kumar Tiwari10
- Lorna Richardson10
- Malachi Griffith10
- Rossana Zaru10
- Thuong Van Du Tran10
- Veronique Voisin10
- Bob Asselbergh9
- Gary Bader9
- Lennart Martens9
- Lieven Clement9
- Louisse Paola Mirabueno9
- Mathieu Bourgey9
- Obi Griffith9
- Osman Salih9
- Rahuman Sheriff9
- Silvie Fexova9
- Tallulah Andrews9
- Thawfeek Mohamed Varusai9
- Typhaine Paysan-Lafosse9
- Ajay Mishra8
- Alexey Larionov8
- Andrew Hercules8
- Bart Mesuere8
- Ben Verhoeven8
- Cath Brooksbank8
- Evelien Van Hamme8
- Fabio Madeira8
- Frank Vernaillen8
- Geert Vermaerke8
- Hema Bye-A-Jee8
- Jared Simpson8
- Jean-luc Doumont8
- Koen Van den Eeckhout8
- Nicolas Peredo8
- Pavankumar Videm8
- Rachel Marcone8
- Tania Wyss8
- Trevor Pugh8
- Alyona Ivanova7
- Arne Defauw7
- Bart Ghesquière7
- Delphi Van Haver7
- Emily Bowler-Barnett7
- Engy Nasr7
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