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Content provider
- European Bioinformatics Institute (EBI)4
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Keyword
- PRIDE: The Proteomics Identifications Database2
- Proteins (proteins)2
- IntAct Molecular Interaction Database1
- Mass spectrometry1
- Protein annotation1
- Protein function1
- Quantitative proteomics1
- Reactome pathways database1
- mass spectrometry1
- protein annotation1
- protein function1
- quantitative proteomics1
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Scientific topic
- Bioinformatics736
- Genome annotation322
- Exomes313
- Genomes313
- Genomics313
- Personal genomics313
- Synthetic genomics313
- Viral genomics313
- Whole genomes313
- Biological modelling218
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- Systems biology218
- Systems modelling218
- Biomedical research192
- Clinical medicine192
- Experimental medicine192
- General medicine192
- Internal medicine192
- Medicine192
- Data management155
- Metadata management155
- Research data management (RDM)155
- Bottom-up proteomics154
- Discovery proteomics154
- MS-based targeted proteomics154
- MS-based untargeted proteomics154
- Metaproteomics154
- Peptide identification154
- Protein and peptide identification154
- Proteomics154
- Quantitative proteomics154
- Targeted proteomics154
- Top-down proteomics154
- Cloud computing59
- Computer science59
- HPC59
- High performance computing59
- High-performance computing59
- Exometabolomics58
- LC-MS-based metabolomics58
- MS-based metabolomics58
- MS-based targeted metabolomics58
- MS-based untargeted metabolomics58
- Mass spectrometry-based metabolomics58
- Metabolites58
- Metabolome58
- Metabolomics58
- Metabonomics58
- NMR-based metabolomics58
- Immunology57
- Computational pharmacology55
- Pharmacoinformatics55
- Pharmacology55
- Comparative transcriptomics53
- Transcriptome53
- Transcriptomics53
- Data archival52
- Data archiving52
- Data curation52
- Data curation and archival52
- Data preservation52
- Database curation52
- Research data archiving52
- Biomathematics51
- Computational biology51
- Mathematical biology51
- Theoretical biology51
- FAIR data50
- Findable, accessible, interoperable, reusable data50
- Pipelines46
- Software integration46
- Tool integration46
- Tool interoperability46
- Workflows46
- Active learning45
- Ensembl learning45
- Kernel methods45
- Knowledge representation45
- Machine learning45
- Neural networks45
- RNA-Seq analysis45
- Recommender system45
- Reinforcement learning45
- Supervised learning45
- Unsupervised learning45
- Data visualisation41
- MicroRNA sequencing36
- RNA sequencing36
- RNA-Seq36
- Small RNA sequencing36
- Small RNA-Seq36
- Small-Seq36
- Transcriptome profiling36
- WTSS36
- Whole transcriptome shotgun sequencing36
- miRNA-seq36
- Data rendering34
- Metagenomics34
- Shotgun metagenomics34
- High-throughput sequencing31
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Event type
- Workshops and courses4
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Country
- United Kingdom2
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Target audience
- The course is aimed at research scientists with a minimum of a degree in a biological discipline, including laboratory and clinical staff, as well as specialists in related fields. The practical elements of the course will take raw data from a proteomics experiment and analyse it. Participants will be able to go from MS spectra to identifying and quantifying peptides, and finally to obtaining lists of protein identifiers that can be analysed further using a wide range of resources. The final aim is to provide attendees with the practical bioinformatics knowledge they need to go back to the lab and process their own data when collected.1
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Instructor
- Deepti Jaiswal Kundu3
- Ananth Prakash Surappa-Narayanappa2
- Eliot Ragueneau2
- Juan Antonio Vizcaino2
- Jyoti Choudhary2
- Kalpana Panneerselvam2
- Kathryn Lilley2
- Krishna Kumar Tiwari2
- Lennart Martens2
- Lieven Clement2
- Shengbo Wang2
- Yasset Perez-Riverol2
- Andy Jones1
- Carlo de Nart1
- Daniela Ferretti1
- James Wright1
- Juan Jose Medina Reyes1
- Kerry Ramsbottom1
- Lisa Breckels1
- Pedro Beltrao1
- Pelagia Kyriakidou1
- Peli Kyriakidou1
- Sreejan Bandyopadhyay1
- Tine Clays1
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