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Content provider
- European Bioinformatics Institute (EBI)2
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Keyword
- Systems (systems)
- IntAct Molecular Interaction Database9
- Complex Portal5
- Reactome pathways database4
- Proteins (proteins)3
- UniProt: The Universal Protein Resource3
- BioModels database2
- Ensembl2
- HMMER - protein homology search2
- InterPro2
- Open access2
- PDBeFold2
- Pfam2
- Protein classification2
- Protein sequence2
- Protein structure2
- Reactome Pathways Analysis2
- ArrayExpress Archive of Functional Genomics Data1
- Biocuration1
- Chemical Entities of Biological Interest1
- Chemical biology (chemical-biology)1
- Cross domain (cross-domain)1
- Cytoscape1
- DNA & RNA (dna-rna)1
- Data curation1
- Data management1
- EBI BioSamples Database1
- ENA Sequence Search1
- Electron Microscopy Public Image Archive - EMPIAR1
- Europe PubMed Central1
- Expression Atlas1
- FAIR1
- GDPR1
- Gene expression (gene-expression)1
- IMEx1
- Logic modelling1
- MetaboLights: Metabolomics repository and reference database1
- Metadata1
- PRIDE: The Proteomics Identifications Database1
- PSICQUIC1
- Pathway enrichment analysis1
- Protein Data Bank in Europe1
- Protein- protein interaction1
- Protein-protein interaction1
- Spatial modelling1
- Structures (structures)1
- Systems (Systems)1
- proteomics1
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Scientific topic
- Biological model1
- Biological modelling1
- Biological models1
- Biological network analysis1
- Biological network modelling1
- Biological network prediction1
- Biological networks1
- Biological pathways1
- Biological system modelling1
- Cellular process pathways1
- Comparative transcriptomics1
- Disease pathways1
- Dynamic systems1
- Dynamical systems1
- Dynymical systems theory1
- Environmental information processing pathways1
- Exomes1
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- Functional genomics1
- Gene regulatory networks1
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- Genome annotation1
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- Interactome1
- Kinetic model1
- LC-MS-based metabolomics1
- MS-based metabolomics1
- MS-based targeted metabolomics1
- MS-based untargeted metabolomics1
- Mass spectrometry-based metabolomics1
- Mathematical model1
- Mathematics1
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- Metabolic pathways1
- Metabolites1
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- Molecular interactions1
- Molecular interactions, pathways and networks1
- Monte Carlo methods1
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- NMR-based metabolomics1
- Network analysis1
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- Personal genomics1
- Protein bioinformatics1
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- Proteins1
- Signal transduction pathways1
- Signaling pathways1
- Synthetic genomics1
- Systems biology1
- Systems modelling1
- Transcriptome1
- Transcriptomics1
- Viral genomics1
- Whole genomes1
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Event type
- Workshops and courses2
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Target audience
- This course is aimed at experimental biologists, bioinformaticians and mathematicians who have just started in systems biology, are familiar with the basic terminology in this field and who are now keen on gaining a better knowledge of systems biology modelling approaches to understand biological and biomedical problems. An experience of using a programming language (e.g Python, R, Matlab) would be a benefit but is not mandatory. An undergraduate knowledge of molecular and cellular biology or some background in mathematics is highly beneficial. 1
- This workshop is aimed at PhD students within the PhD programme "Genetics, Molecular and Cellular Biology" (University of Pavia) and the PhD programmme "Biomolecular Sciences and Biotechnology" (IUSS, University School for Advanced Studies Pavia. No knowledge of programming is required, but an undergraduate level knowledge of biology or molecular biology would be useful.1
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Instructor
- Birgit Meldal
- Alexandra Holinski2
- Kalpana Panneerselvam2
- Lutz Brusch2
- Rahuman Sheriff2
- Thawfeek Varusai2
- Tomas Helikar2
- Adnan Malik1
- Adrian Turjanski1
- Alfonso Martinez Arias1
- Alfonso Martinez-Arias1
- Andre Fujita1
- Andreas Dräger1
- Artur Trancoso Lopo de Queiroz1
- Aurelien Luciani1
- Carmen Pin1
- Dario Fernández Do Porto1
- David Armstrong1
- Dayane Rodrigues Araujo1
- Deborah Harrus1
- Diego Jahn1
- Eliot Rageneau1
- Eliot Ragueneau1
- Elisa Passini1
- Emily Perry1
- Ernesto Perez-Rueda1
- Eva Geissen1
- Gaurhari Dass1
- Helder Nakaya1
- Henning Hermjakob1
- James Yates1
- Julieth Irene Murillo Silva1
- Jörn Starruß1
- Kalpana Paneerselvam1
- Kausthubh Ramachandran1
- Keeva Cochrane1
- Kiyoshi Fukutani1
- Krishna Kumar Tiwari1
- Markus Krummenacker 1
- Nancy George1
- Nandana Madhusoodanan1
- Pablo Ivan Pereira Ramos1
- Pablo Porras Millan1
- Paul Denny1
- Pedro Raposo1
- Peter Karp1
- Piv Gopalasingam1
- Rea Antoniou-Kourounioti1
- Robert Mueller1
- Rossana Zaru1
- Sara Rocio Chuguransky1
- Sara-Jane Dunn1
- Suzanne Paley1
- Thawfeek Mohamed Varusai1
- Typhaine Paysan-Lafosse1
- Ugis Sarkans1
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