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Content provider
- European Bioinformatics Institute (EBI)1
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Keyword
- Genomics
- Ensembl11
- DNA & RNA (dna-rna)7
- Gene expression (gene-expression)3
- Ensembl Genomes2
- Ensembl Variant Effect Predictor2
- API1
- ArrayExpress Archive of Functional Genomics Data1
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- IntAct Molecular Interaction Database1
- LD calculator1
- Linkage Disequilibrium between variants1
- MetaboLights: Metabolomics repository and reference database1
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- Protein Data Bank in Europe1
- Proteins (proteins)1
- REST1
- Reactome pathways database1
- Structures (structures)1
- Symbiotes1
- Systems (systems)1
- UniProt: The Universal Protein Resource1
- Wheat genes1
- Wheat genome1
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Scientific topic
- Breakend assembly1
- Chromosome walking1
- Clone verification1
- DNA-Seq1
- DNase-Seq1
- Genome alignment1
- Genome alignment construction1
- Genome assembly1
- Genomic assembly1
- High throughput sequencing1
- High-throughput sequencing1
- NGS1
- NGS data analysis1
- Next gen sequencing1
- Next generation sequencing1
- Panels1
- Primer walking1
- Sanger sequencing1
- Sequence assembly (genome assembly)1
- Sequencing1
- Targeted next-generation sequencing panels1
- Whole genome alignment1
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Event type
- Workshops and courses1
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Target audience
- The course is aimed at early-stage researchers working in the field of ecological genomics who want to make bioinformatics a significant part of their research. The course will also support the research of the Moore Foundation symbiosis community, in particular those working on the Aquatic Symbiosis Genomes project. Participants will require a basic knowledge of the Unix command line and the Ubuntu 18 operating system. We recommend taking these tutorials: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Linux: https://training.linuxfoundation.org/free-linux-training Experience with both R and Python will also be essential for the computational sessions. Participants without basic knowledge of these resources will struggle to learn the practical skills developed during the course.1
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Instructor
- Emily Perry
- Allegra Via3
- Loredana Le Pera3
- Luca De Sabato3
- Arnold Knijn2
- Elena Kuzmin2
- Emma Bell2
- Linda Xiang2
- Trevor Pugh2
- Valeria Michelacci2
- Veronique Voisin2
- Vida Talebian2
- Yoshiaki Tanaka2
- Zahra Tavakol2
- Aki Ohdera1
- Alan Tracey1
- Alexey Sokolov1
- Andrea Guarracino1
- Camila Eldridge1
- Caroline Howard1
- Claudia Weber1
- Corinna Breusing1
- Damiano Parrone1
- Elizabeth Heath-Heckman1
- Emmelein Vancaester1
- Erik Garrison1
- Erin Pleasance1
- Fergal Martin1
- Graeme Oatley1
- Ido Hatam1
- James Torrance1
- Jo Collins1
- Jo Wood1
- John Archibald1
- Jose M Chema Martin Duran1
- Lewis Stevens1
- Mara Lawniczak1
- Marcela Uliano1
- Mark Blaxter1
- Massimiliano Orsini1
- Michael Paulini1
- Nancy Halroyd1
- Pablo Gonzalez1
- Radka Platte1
- Rich Challis1
- Sarah Pelan1
- Shana Goffredi1
- Shane McCarthy1
- Sujai Kumar1
- Victoria McKenna1
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