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Content provider
- European Bioinformatics Institute (EBI)3
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Scientific topic
- Genomics
- Exomes3
- Genome annotation3
- Genomes3
- Personal genomics3
- Synthetic genomics3
- Viral genomics3
- Whole genomes3
- Animal study1
- Challenge study1
- Chromosome walking1
- Clone verification1
- DNA-Seq1
- DNase-Seq1
- Genes1
- Genetics1
- Genome browser1
- Genome browsing1
- Genome rendering1
- Genome viewing1
- Genome visualisation1
- Genotype1
- Genotype and phenotype1
- Genotype and phenotype resources1
- Genotype-phenotype1
- Genotype-phenotype analysis1
- Genotyping1
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- High-throughput sequencing1
- NGS1
- NGS data analysis1
- Next gen sequencing1
- Next generation sequencing1
- Panels1
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- Primer walking1
- Protein interaction map1
- Protein interaction networks1
- Protein interactions1
- Protein interactome1
- Protein-DNA interaction1
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- Protein-RNA interaction1
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- Protein-ligand interactions1
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- R1
- R program1
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- Sanger sequencing1
- Sequencing1
- Structural assignment1
- Structural biology1
- Structural determination1
- Structure determination1
- Targeted next-generation sequencing panels1
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Event type
- Workshops and courses3
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Country
- Italy1
- Mexico1
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Target audience
- The course is suitable for graduate students and young researchers with a background in biology who are keen to become proficient bioinformaticians within the fields of genomics and/or transcriptomics. We will start with the basics, so students with no prior programming knowledge are welcome. We have a number of Linux computers that you can use, and you can bring your own laptops*. Please note this course will be taught in English, however the trainers are fluent in either Spanish or Portuguese, and can offer language support where feasible. A number of travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form. *If you bring your own laptop (any operating system is fine), you must have installed the following programs: R (at least version 3.5), the latest Rstudio and Bioconductor. To download R please visit: https://www.r-project.org/ To download RStudio please visit: https://www.rstudio.com/products/rstudio/download/ Bioconductor must be downloaded and installed via R, instructions on how to do this can be found here: https://www.bioconductor.org/install/1
- This course is aimed at researchers at any career stage within the University of Pavia and Institute of Molecular Genetics who are working with and/or generating their own genomic and biomolecular datasets. No knowledge of programming is required, but an undergraduate level knowledge of Biology / molecular biology would be beneficial.1
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Instructor
- Erin Haskell
- Alexey Larionov6
- Francesco Iorio5
- Tobias Rausch5
- Ajay Mishra4
- Mathieu Bourgey4
- Christoph Stritt3
- Daniela Brites3
- Moritz Gerstung3
- Sam Holt3
- Andrea Cabibbe2
- Arash Ghodousi2
- Astrid Gall2
- Baron Koylass2
- Benjamin Moore2
- Bethlehem Adnew2
- Birgit Meldal2
- Carla Valeria Filippi2
- David Armstrong2
- Diana Lopez2
- Federico DiMarco2
- Liliana Rutaihwa2
- Linzy Elton2
- Manuel Humberto Reyes-Valdes2
- Octavio Martinez de la Vega2
- Peter van Heusden2
- Robert Eveleigh2
- Silvie Fexova2
- Wendi Bacon2
- Adnan Malik1
- Alan Archibald1
- Aleena Mushtaq1
- Alex Mitchell1
- Ana Cvejic1
- Aurélie Ernst1
- Benilton Carvalho1
- Bilal El Houdaigui1
- Bruno Contreras-Moreira1
- Cath Brooksbank1
- Cei Abreu Goodger1
- Charles Solomon1
- Chiara Batini1
- Daniel Macqueen1
- Daniel Poppleton1
- Dave Edwards1
- David Urbina1
- Deborah Harrus1
- Emily Perry1
- Faye Rodgers1
- Francesc Muyas Remolar1
- Francisco Lobo1
- Galo A. Goig1
- Gareth Gillard1
- Garth Ilsley1
- Ilias Lavidas1
- Isidro Cortes Ciriano1
- Isidro Cortes-Ciriano1
- Jan Kreuze1
- Jane Loveland1
- Jorge Batista da Rocha1
- Juan Pablo Nani1
- Kalpana Paneerselvam1
- Keeva Cochrane1
- Kostas Billis1
- Lars Grønvold1
- Louisse Mirabueno1
- Malcolm Perry1
- Manuel More1
- Marco Cristancho1
- Matthew Young1
- Mauricio Montero1
- Nancy George1
- Natalia Barboza1
- Natalia Pin Viso1
- Pamela Victoria Villalba1
- Peter Causey-Freeman1
- Piraveen Gopalasingam1
- Pooran Dewari1
- Rafael Penha Filho1
- Ricardo Alcalá Briseño1
- Ricardo Chinchilla1
- Rossana Zaru1
- Sean Laidlaw1
- Segundo Fuentes1
- Simone Zaccaria1
- Thawfeek Varusai1
- Thibaut Hourlier1
- Thomas Juettemann1
- Tom Hancocks1
- Ugis Sarkans1
- Veronica Busa1
- Walter Barrantes1
- Wendy Acuna1
- Wojtek Bazant1
- Yuanhua Huang1
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