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- European Bioinformatics Institute (EBI)4
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Keyword
- Complex Portal2
- IntAct Molecular Interaction Database2
- Proteins (proteins)2
- Reactome pathways database2
- UniProt: The Universal Protein Resource2
- ArrayExpress Archive of Functional Genomics Data1
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- Electron Microscopy Public Image Archive - EMPIAR1
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- HMMER - protein homology search1
- InterPro1
- MetaboLights: Metabolomics repository and reference database1
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- Protein Data Bank in Europe1
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Scientific topic
- Protein bioinformatics2
- Protein databases2
- Protein informatics2
- Proteins2
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Event type
- Workshops and courses4
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Country
- United Kingdom2
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Target audience
- This course is aimed at advanced PhD students and post-doctoral researchers who are currently working with large-scale omics datasets with the aim of discerning biological function and processes. Ideal applicants should already have some experience (ideally 1-2 years) working with systems biology or related large-scale multi-omics data analyses. Applicants are expected to have a working knowledge of the Linux operating system and the ability to use the command line. Experience of using a programming language (i.e. Python) is highly desirable, and while the course will make use of simple coding or streamlined approaches such as Python notebooks, higher levels of competency will allow participants to focus on the scientific methodologies rather than the practical aspects of coding and how they can be applied in their own research. We recommend these free tutorials: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Linux: https://training.linuxfoundation.org/free-linux-training Python turorial: https://www.w3schools.com/python/ R tutorial: https://www.datacamp.com/courses/free-introduction-to-r Regardless of your current knowledge we encourage successful participants to use these, and other materials, to prepare for attending the course and future work in this area.1
- This workshop is aimed at PhD students within the PhD programme "Genetics, Molecular and Cellular Biology" (University of Pavia) and the PhD programmme "Biomolecular Sciences and Biotechnology" (IUSS, University School for Advanced Studies Pavia. No knowledge of programming is required, but an undergraduate level knowledge of biology or molecular biology would be useful.1
- This workshop is aimed at anyone interested in finding out more about protein biology. No prior experience of bioinformatics is required, but an undergraduate level understanding of biology would be of benefit.1
- This workshop is aimed at life science researchers, who are interested in extracting data and evidence from research literature. It will help those who want to identify cited datasets for reuse, further analyses, background research, or as supporting data for own hypotheses. The workshop would also be of interest to those who are applying or planning to apply literature analysis/text-mining in their own research projects. Participants will benefit from an undergraduate level knowledge of biology. Participants should ideally have some bioinformatics experience and/or basic understanding of programmatic access. Please note that this workshop requires no prior knowledge of text analytics or computer programming skills. Regardless of your current knowledge, we encourage participants to explore this short series of recorded webinars on an introduction to programmatic access.1
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Instructor
- Kalpana Paneerselvam
- Aleena Mushtaq29
- Benjamin Moore18
- David Armstrong17
- Michal Szpak17
- Nancy George17
- Birgit Meldal15
- Sarah Morgan14
- Tom Hancocks14
- Alexandra Holinski13
- Baron Koylass13
- Emily Perry13
- Anna Swan12
- Dayane Rodrigues Araujo12
- Sam Holt12
- Kalpana Panneerselvam11
- Lee Larcombe11
- Alex Bateman10
- Alexandre Bonvin10
- Krishna Kumar Tiwari10
- Lorna Richardson10
- Rossana Zaru10
- Wendi Bacon10
- Louisse Paola Mirabueno9
- Osman Salih9
- Rahuman Sheriff9
- Silvie Fexova9
- Thawfeek Mohamed Varusai9
- Typhaine Paysan-Lafosse9
- Ajay Mishra8
- Alexey Larionov8
- Andrew Hercules8
- Cath Brooksbank8
- Eliot Ragueneau8
- Fabio Madeira8
- Hema Bye-A-Jee8
- Emily Bowler-Barnett7
- Gerard Kleywegt7
- Livia Perfetto7
- Nandana Madhusoodanan7
- Pablo Porras Millan7
- Piraveen Gopalasingam7
- Tobias Rausch7
- Ugis Sarkans7
- Francesco Iorio6
- Nikiforos Karamanis6
- Patricia Carvajal Lopez6
- Pedro Raposo6
- Sandra Orchard6
- Astrid Gall5
- Attilio Vittorio Vargiu5
- Blake Sweeney5
- Giuliano Malloci5
- James Stephenson5
- Jonathan Manning5
- Julia Foreman5
- Maira Ihsan5
- Pablo Moreno5
- Paul Denny5
- Piv Gopalasingam5
- Sarah Butcher5
- Thawfeek Varusai5
- Alessandra Villa4
- Anton Petrov4
- Aurelien Dugourd4
- Chris Quince4
- Denise Carvalho-Silva4
- Dona Shaju4
- Erin Haskell4
- Evangelia Petsalaki4
- George Georghiou4
- Girolamo Giudice4
- Gun Antonia Nilsson Lock4
- Henning Hermjakob4
- Irene Papatheodorou4
- Johannes Griss4
- Josephine Burgin4
- Juan Antonio Vizcaino4
- Kostas Billis4
- Leanne Haggerty4
- Lennart Martens4
- Liis Kolberg4
- Marton Olbei4
- Mathieu Bourgey4
- Michele Magrane4
- Peter McQuilton4
- Preeti Choudhary4
- Ricard Argelaguet4
- Sara Rocio Chuguransky4
- Simon Andrews4
- Summer Rosonovski4
- Varsha Kale4
- Vera Matser4
- Vytautas Gapsys4
- Yasset Perez-Riverol4
- Yvonne Lussi4
- Zhichao Miao4
- Adam Hospital3
- Adrian Turjanski3
- Alex Mitchell3
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