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Content provider
- European Bioinformatics Institute (EBI)2
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Keyword
- IntAct Molecular Interaction Database1
- Mass spectrometry1
- PRIDE: The Proteomics Identifications Database1
- Protein annotation1
- Protein function1
- Proteins (proteins)1
- Quantitative proteomics1
- Reactome pathways database1
- mass spectrometry1
- protein annotation1
- protein function1
- quantitative proteomics1
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Scientific topic
- DIA
- Bottom-up proteomics3
- Discovery proteomics3
- MS-based targeted proteomics3
- MS-based untargeted proteomics3
- Metaproteomics3
- Peptide identification3
- Protein and peptide identification3
- Proteomics3
- Quantitative proteomics3
- Targeted proteomics3
- Top-down proteomics3
- 2D PAGE experiment2
- Amino acid sequence2
- Amino acid sequences2
- Data-independent acquisition2
- MS2
- MS experiments2
- Mass spectrometry2
- Mass spectrometry experiments2
- Northern blot experiment2
- Protein sequence2
- Protein sequences2
- Proteomics experiment2
- Spectrum demultiplexing2
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Event type
- Workshops and courses2
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Country
- United Kingdom2
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Target audience
- The course is aimed at research scientists with a minimum of a degree in a biological discipline, including laboratory and clinical staff, as well as specialists in related fields. The practical elements of the course will take raw data from a proteomics experiment and analyse it. Participants will be able to go from MS spectra to identifying and quantifying peptides, and finally to obtaining lists of protein identifiers that can be analysed further using a wide range of resources. The final aim is to provide attendees with the practical bioinformatics knowledge they need to go back to the lab and process their own data when collected.1
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Instructor
- Lieven Clement
- Deepti Jaiswal Kundu3
- Ananth Prakash Surappa-Narayanappa2
- Eliot Ragueneau2
- Juan Antonio Vizcaino2
- Jyoti Choudhary2
- Kalpana Panneerselvam2
- Kathryn Lilley2
- Krishna Kumar Tiwari2
- Lennart Martens2
- Shengbo Wang2
- Yasset Perez-Riverol2
- Andy Jones1
- Carlo de Nart1
- Daniela Ferretti1
- James Wright1
- Juan Jose Medina Reyes1
- Kerry Ramsbottom1
- Lisa Breckels1
- Pedro Beltrao1
- Pelagia Kyriakidou1
- Peli Kyriakidou1
- Sreejan Bandyopadhyay1
- Tine Clays1
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