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Keyword
- Bioinformatics4
- Computational simulations3
- Data protection3
- H3Africa genotyping array3
- Nextflow3
- African populations2
- Cancer therapy response2
- Cloud computing2
- GPU2
- GWAS workflow2
- Genome Wide Association Studies2
- Genotype calling2
- H3ABioNet2
- H3ABioNet GWAS 2018 Lecture Series2
- Population Genomics2
- Signalling prior knowledge2
- Virtual humans2
- Workflows2
- AI based tools1
- AI structure prediction1
- Africa1
- Agent-based modelling1
- AlphaFold1
- AlphaFold Database1
- AlphaFold Database (13181)1
- Annotations1
- Array processing1
- BioCloud1
- Boolean1
- Boolean modelling1
- Building blocks1
- Carbon footprint1
- Cell signaling1
- Chemical biology1
- Cheminformatics1
- Competency framework1
- Computational Biology1
- Constraint-based metabolic modelling1
- Convert to PLINK format 1
- Data analysis1
- De novo modeling1
- Deep Learning1
- Demonstration1
- Discordant Sex information1
- Docker1
- Drug design1
- Drug discovery1
- Drug screening1
- Drug-target identification1
- Environmental impact1
- File formats1
- GWAS1
- Galaxy Australia1
- Genome Studio1
- Genotype array probes1
- Genotyping1
- Genotyping array analysis 1
- Genotyping rate call1
- Green Algorithms1
- HPC1
- HPC workflows1
- Hardy Weinberg Equilibrium1
- Heterozygosity rate1
- High performance computing1
- Human genomics1
- Identity by Descent1
- Illumina arrays1
- Immunology1
- Intensities1
- Low minor allele frequency1
- Macrophages1
- Missingness1
- Molecular docking1
- Non-polymorphic1
- Open data1
- Orchestrator1
- PLINK format1
- Pharmacophores1
- Pipelines1
- Principal Component Analysis1
- QSAR1
- Quality Control for GWAS1
- Quantum mechanics/molecular mechanics1
- Related and duplicate individuals1
- Reproducible Science1
- Research infrastructure1
- SNP Quality Control1
- Sample Quality Control1
- Top/Bottom annotation1
- Tumorigenesis1
- bioinformatics1
- cancer1
- federated analysis1
- galaxy project1
- in silico drug design1
- molecular modelling1
- nf-core1
- polygenic risk scores1
- protein drug design1
- workflows1
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Scientific topic
- Biomathematics
- Bioinformatics76
- Data management69
- Metadata management69
- Research data management (RDM)69
- Genome annotation45
- Exomes42
- Genomes42
- Genomics42
- Personal genomics42
- Synthetic genomics42
- Viral genomics42
- Whole genomes42
- Active learning30
- Ensembl learning30
- Kernel methods30
- Knowledge representation30
- Machine learning30
- Neural networks30
- Recommender system30
- Reinforcement learning30
- Supervised learning30
- Unsupervised learning30
- Data archival29
- Data archiving29
- Data curation29
- Data curation and archival29
- Data preservation29
- Database curation29
- Research data archiving29
- Computational biology27
- Mathematical biology27
- Theoretical biology27
- FAIR data26
- Findable, accessible, interoperable, reusable data26
- Protein function analysis26
- Protein function prediction26
- Pipelines25
- Protein structure25
- Software integration25
- Tool integration25
- Tool interoperability25
- Workflows25
- Antimicrobial stewardship24
- Medical microbiology24
- Microbial genetics24
- Microbial physiology24
- Microbial surveillance24
- Microbiological surveillance24
- Microbiology24
- Molecular infection biology24
- Molecular microbiology24
- Protein bioinformatics24
- Protein databases24
- Protein informatics24
- Proteins24
- RNA-Seq analysis24
- Comparative transcriptomics22
- Transcriptome22
- Transcriptomics22
- Protein structures21
- Molecular diagnostics19
- Personalised medicine19
- Precision medicine19
- Community analysis18
- Environmental microbiology18
- Function analysis18
- Functional analysis18
- Microbial ecology18
- Microbiome18
- Molecular community analysis18
- DNA variation17
- Genetic variation17
- Genomic variation17
- Mutation17
- Polymorphism17
- Somatic mutations17
- Data visualisation16
- MicroRNA sequencing16
- RNA sequencing16
- RNA-Seq16
- Small RNA sequencing16
- Small RNA-Seq16
- Small-Seq16
- Transcriptome profiling16
- WTSS16
- Whole transcriptome shotgun sequencing16
- miRNA-seq16
- Bioimaging15
- Biological imaging15
- Exometabolomics15
- LC-MS-based metabolomics15
- MS-based metabolomics15
- MS-based targeted metabolomics15
- MS-based untargeted metabolomics15
- Mass spectrometry-based metabolomics15
- Metabolites15
- Metabolome15
- Metabolomics15
- Metabonomics15
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Operation
- Attribute selection1
- Binding site prediction1
- CG analysis1
- Chemical class enrichment1
- Chemical similarity enrichment1
- Contact map prediction1
- Docking simulation1
- Feature extraction1
- Feature projection1
- Feature selection1
- Hydrogen bond calculation1
- Ligand-binding site detection1
- Ligand-binding site prediction1
- MD analysis1
- Macromolecular docking1
- Molecular docking1
- Molecular dynamics1
- Molecular dynamics simulation1
- Molecular surface analysis1
- Nucleic Acid Dynamics Analysis1
- Optimisation and refinement1
- Peptide-protein binding prediction1
- Protein Dynamics Analysis1
- Protein binding site detection1
- Protein binding site prediction1
- Protein contact map prediction1
- Protein design1
- Protein dynamics1
- Protein flexibility and motion analysis1
- Protein flexibility prediction1
- Protein folding pathway prediction1
- Protein motion prediction1
- Protein property calculation1
- Protein property calculation (from sequence)1
- Protein property calculation (from structure)1
- Protein property rendering1
- Protein redesign1
- Protein structural property calculation1
- Protein structure prediction1
- Rational protein design1
- Residue contact prediction1
- Residue interaction calculation1
- Residue interaction prediction1
- Simulation analysis1
- Structural property calculation1
- Structure analysis1
- Structure database search1
- Trajectory analysis1
- Trajectory visualization1
- Variable selection1
- Variable subset selection1
- de novo protein design1
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Tool
- AlphaFold 22
- AlphaCharges1
- AlphaFill1
- AlphaFind1
- AutoDock Vina1
- CAVER1
- CAVER Web1
- CalFitter1
- CaverDock1
- EnzymeMiner1
- FireProt1
- FireProt 2.01
- FireProt ASR1
- FireProtDB1
- Galaxy1
- HotSpot Wizard1
- LoopGrafter1
- PyMOL1
- SPCI1
- SoluProt1
- SoluProtMutsupDB1
- Tamarind1
- TmAlphaFold database1
- pyCaverDock1
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Target audience
- Anyone intersted in GWAS and using the H3Africa genotyping chip3
- Life Science Researchers2
- Academics1
- Anyone who wants to learn more about GWAS1
- Bioinformatician1
- Biologists1
- Biologists, Genomicists, Computer Scientists1
- Clinical Scientists1
- Computational biologists1
- Doctoral students1
- Early Career Researcher1
- Industry1
- Master students1
- PhD Students1
- Post Docs1
- Researchers1
- bioinformaticians1
- postdocs1
- software developers, bioinformaticians1
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Language
- English2
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Instructor
- Adam Smelko1
- Anna Niarakis1
- Anshika Chowdhary1
- Arnau Montagud1
- Jesse Harrison1
- Joaquín Dopazo1
- Laurence Calzone1
- Loïc Lannelongue1
- Malvina Marku1
- Marco Fariñas1
- Marco Ruscone1
- Mariano Vázquez1
- Paul Macklin1
- St. Elmo Wilken1
- Vera Pancaldi1
- Viviam Bermúdez1
- Will Rayner1
- Åsmund Flobak1
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