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Content provider
- European Bioinformatics Institute (EBI)3
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Scientific topic
- Bioinformatics76
- Data management69
- Metadata management69
- Research data management (RDM)69
- Genome annotation45
- Exomes42
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- Genomics42
- Personal genomics42
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- Active learning30
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- Knowledge representation30
- Machine learning30
- Neural networks30
- Recommender system30
- Reinforcement learning30
- Supervised learning30
- Unsupervised learning30
- Data archival29
- Data archiving29
- Data curation29
- Data curation and archival29
- Data preservation29
- Database curation29
- Research data archiving29
- Biomathematics27
- Computational biology27
- Mathematical biology27
- Theoretical biology27
- FAIR data26
- Findable, accessible, interoperable, reusable data26
- Protein function analysis26
- Protein function prediction26
- Pipelines25
- Protein structure25
- Software integration25
- Tool integration25
- Tool interoperability25
- Workflows25
- Antimicrobial stewardship24
- Medical microbiology24
- Microbial genetics24
- Microbial physiology24
- Microbial surveillance24
- Microbiological surveillance24
- Microbiology24
- Molecular infection biology24
- Molecular microbiology24
- Protein bioinformatics24
- Protein databases24
- Protein informatics24
- Proteins24
- RNA-Seq analysis24
- Comparative transcriptomics22
- Transcriptome22
- Transcriptomics22
- Protein structures21
- Molecular diagnostics19
- Personalised medicine19
- Precision medicine19
- Community analysis18
- Environmental microbiology18
- Function analysis18
- Functional analysis18
- Microbial ecology18
- Microbiome18
- Molecular community analysis18
- DNA variation17
- Genetic variation17
- Genomic variation17
- Mutation17
- Polymorphism17
- Somatic mutations17
- Data visualisation16
- MicroRNA sequencing16
- RNA sequencing16
- RNA-Seq16
- Small RNA sequencing16
- Small RNA-Seq16
- Small-Seq16
- Transcriptome profiling16
- WTSS16
- Whole transcriptome shotgun sequencing16
- miRNA-seq16
- Bioimaging15
- Biological imaging15
- Exometabolomics15
- LC-MS-based metabolomics15
- MS-based metabolomics15
- MS-based targeted metabolomics15
- MS-based untargeted metabolomics15
- Mass spectrometry-based metabolomics15
- Metabolites15
- Metabolome15
- Metabolomics15
- Metabonomics15
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Event type
- Workshops and courses3
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Venue
- , 1
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Target audience
- The course is aimed at early-stage researchers working in the field of ecological genomics who want to make bioinformatics a significant part of their research. The course will also support the research of the Moore Foundation symbiosis community, in particular those working on the Aquatic Symbiosis Genomes project. Participants will require a basic knowledge of the Unix command line and the Ubuntu 18 operating system. We recommend taking these tutorials: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Linux: https://training.linuxfoundation.org/free-linux-training Experience with both R and Python will also be essential for the computational sessions. Participants without basic knowledge of these resources will struggle to learn the practical skills developed during the course.1
- This course is aimed at life scientists who are working in the field of metagenomics and are currently in the early stages of data analysis. Participants should have some prior experience of using bioinformatics in their research. The practical sessions in the course require a basic understanding of the Unix command line and the R statistics package. If you are not already familiar with these then please ensure that you complete these free tutorials before you attend the course: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Basic R concept tutorials: www.r-tutor.com/r-introduction1
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Instructor
- Aki Ohdera1
- Alan Tracey1
- Alexey Sokolov1
- Ben Allen1
- Camila Eldridge1
- Caroline Howard1
- Chris Quince1
- Claudia Weber1
- Corinna Breusing1
- Elizabeth Heath-Heckman1
- Emily Perry1
- Emmelein Vancaester1
- Fergal Martin1
- Georg Zeller1
- Graeme Oatley1
- Jakob Wirbel1
- James Torrance1
- Jo Collins1
- Jo Wood1
- John Archibald1
- Jose M Chema Martin Duran1
- Josephine Burgin1
- Juan Caballero Perez1
- Lewis Stevens1
- Lorna Richardson1
- Mara Lawniczak1
- Marcela Uliano1
- Mark Blaxter1
- Martin Beracochea1
- Michael Paulini1
- Nancy Halroyd1
- Pablo Gonzalez1
- Radka Platte1
- Rich Challis1
- Sandy Alexander Rogers1
- Sarah Pelan1
- Sebastien Raguideau1
- Shana Goffredi1
- Shane McCarthy1
- Sujai Kumar1
- Tatiana Gurbich1
- Varsha Kale1
- Victoria McKenna1
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