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Content provider
- European Bioinformatics Institute (EBI)8
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Scientific topic
- Bioinformatics76
- Data management70
- Metadata management70
- Research data management (RDM)70
- Genome annotation45
- Exomes42
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- Personal genomics42
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- Active learning30
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- Recommender system30
- Reinforcement learning30
- Supervised learning30
- Unsupervised learning30
- Data archival29
- Data archiving29
- Data curation29
- Data curation and archival29
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- Database curation29
- Research data archiving29
- Biomathematics27
- Computational biology27
- Mathematical biology27
- Theoretical biology27
- FAIR data26
- Findable, accessible, interoperable, reusable data26
- Protein function analysis26
- Protein function prediction26
- Pipelines25
- Protein structure25
- Software integration25
- Tool integration25
- Tool interoperability25
- Workflows25
- Antimicrobial stewardship24
- Medical microbiology24
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- Microbial surveillance24
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- Microbiology24
- Molecular infection biology24
- Molecular microbiology24
- Protein bioinformatics24
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- Protein informatics24
- Proteins24
- RNA-Seq analysis24
- Comparative transcriptomics22
- Transcriptome22
- Transcriptomics22
- Protein structures21
- Molecular diagnostics19
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- Community analysis18
- Environmental microbiology18
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- Microbial ecology18
- Microbiome18
- Molecular community analysis18
- DNA variation17
- Genetic variation17
- Genomic variation17
- Mutation17
- Polymorphism17
- Somatic mutations17
- Data visualisation16
- MicroRNA sequencing16
- RNA sequencing16
- RNA-Seq16
- Small RNA sequencing16
- Small RNA-Seq16
- Small-Seq16
- Transcriptome profiling16
- WTSS16
- Whole transcriptome shotgun sequencing16
- miRNA-seq16
- Bioimaging15
- Biological imaging15
- Exometabolomics15
- LC-MS-based metabolomics15
- MS-based metabolomics15
- MS-based targeted metabolomics15
- MS-based untargeted metabolomics15
- Mass spectrometry-based metabolomics15
- Metabolites15
- Metabolome15
- Metabolomics15
- Metabonomics15
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Event type
- Workshops and courses8
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Country
- Brazil1
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Target audience
- This course is aimed at life scientists who are working in the field of metagenomics and are currently in the early stages of data analysis. Participants should have some prior experience of using bioinformatics in their research. The practical sessions in the course require a basic understanding of the Unix command line and the R statistics package. If you are not already familiar with these then please ensure that you complete these free tutorials before you attend the course: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Basic R concept tutorials: www.r-tutor.com/r-introduction1
- This course is intended for graduate students, postdocs and young researchers working in the fields of metagenomics and viral discovery in the CABANA grand challenge areas of communicable diseases, protection of biodiversity, and/or sustainable crop production. Applicants must be employed within Latin America only. Additional we cannot accept applications from Chile or Uruguay due to funding restrictions. Prerequisites Please note this course will be taught in English, however the trainers are fluent in either Spanish/Portuguese, and can offer language support where feasible. Priority will also be given to those who have not attended a CABANA event yet. Students should be familiar with using the Linux command line. As the course will be held remotely, all students must have Zoom previously installed on their computers. Also, as classes will be held synchronously, a good Internet connection is mandatory. A knowledge of virology, especially from previous research experience, is also desirable. Scientists from underrepresented ethnic and gender groups are especially encouraged to apply for this workshop, for example women and those with Black and/or Indigenous heritage. 1
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Instructor
- Chris Quince2
- Josephine Burgin2
- Juan Caballero Perez2
- Lorna Richardson2
- Sebastien Raguideau2
- Tatiana Gurbich2
- Varsha Kale2
- Alexander Rogers1
- Antonio Marinho da Silva Neto1
- Arthur Gruber1
- Ben Allen1
- Felipe Naveca1
- Georg Zeller1
- Grisel Alejandra Escobar Zepeda1
- Guillermo Rangel-Pineros1
- Jakob Wirbel1
- Jennifer Lu1
- Liliane S. Oliveira Kashiwabara1
- Maira Ihsan1
- Martin Beracochea1
- Nadim Mahdi Rahman1
- Piv Gopalasingam1
- Renato Oliveira1
- Richard Leggett1
- Robson Francisco de Souza1
- Sam Holt1
- Sandy Alexander Rogers1
- Tulio de Lima Campos1
- Vladimir Benes1
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