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Content provider
- European Bioinformatics Institute (EBI)8
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Keyword
- UniProt: The Universal Protein Resource7
- Proteins (proteins)3
- PRIDE: The Proteomics Identifications Database2
- BioImage Archive1
- COVID-191
- Ensembl Plants1
- European Nucleotide Archive1
- European Variation Archive1
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- MetaboLights: Metabolomics repository and reference database1
- Proetome resource1
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- Protein families1
- Protein functional analysis1
- Protein sequences1
- Proteins1
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- Reactome pathways database1
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- UniProtKB1
- proteomics1
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Scientific topic
- Bioinformatics76
- Data management69
- Metadata management69
- Research data management (RDM)69
- Genome annotation45
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- Active learning30
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- Biomathematics27
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- FAIR data26
- Findable, accessible, interoperable, reusable data26
- Protein function analysis26
- Protein function prediction26
- Pipelines25
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- Software integration25
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- Protein bioinformatics24
- Protein databases24
- Protein informatics24
- Proteins24
- RNA-Seq analysis24
- Comparative transcriptomics22
- Transcriptome22
- Transcriptomics22
- Protein structures21
- Molecular diagnostics19
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- miRNA-seq16
- Bioimaging15
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- Exometabolomics15
- LC-MS-based metabolomics15
- MS-based metabolomics15
- MS-based targeted metabolomics15
- MS-based untargeted metabolomics15
- Mass spectrometry-based metabolomics15
- Metabolites15
- Metabolome15
- Metabolomics15
- Metabonomics15
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Event type
- Workshops and courses9
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Venue
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Target audience
- The course is aimed at research scientists with a minimum of a degree in a biological discipline, including laboratory and clinical staff, as well as specialists in related fields. The practical elements of the course will take raw data from a proteomics experiment and analyse it. Participants will be able to go from MS spectra to identifying and quantify peptides and finally to obtain lists of protein identifiers that can be analysed further using a wide range of resources. The final aim is to provide attendees with the practical bioinformatics knowledge they need to go back to the lab and process their own data when collected.1
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Eligibility
- First come first served1
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Instructor
- Birgit Meldal1
- Cecilia Arighi1
- Christoph Wichmann1
- David García Seisdedos1
- Deepti Kundu1
- Emily Bowler-Barnett1
- Harald Barsnes1
- Juan Antonio Vizcaino1
- Kalpana Panneerselvam1
- Kathryn Lilley1
- Lennart Martens1
- Lieven Clement1
- Oliver Crook1
- Paul Denny1
- Peli Kyriakidou1
- Sangya Pundir1
- Thawfeek Varusai1
- Typhaine Paysan-Lafosse1
- Yasset Perez-Riverol1
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