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Keyword
- Proteins (proteins)15
- Protein Data Bank in Europe13
- UniProt: The Universal Protein Resource8
- AlphaFold Database6
- PDBe5
- Ensembl4
- Genetic variants4
- InterPro4
- Structures (structures)4
- API3
- Ensembl Variant Effect Predictor3
- Programmatic access3
- Reactome pathways database3
- AI2
- Artificial intelligence2
- ChEMBL: Bioactive data for drug discovery2
- Chemical biology (chemical-biology)2
- Complex Portal2
- Electron Microscopy Public Image Archive - EMPIAR2
- IntAct Molecular Interaction Database2
- infection biology2
- small molecules2
- structural bioinformatics2
- AI system1
- Aggregated view1
- AlphaFold1
- ArrayExpress Archive of Functional Genomics Data1
- Chemical Entities of Biological Interest1
- DNA & RNA (dna-rna)1
- Data visualisation1
- DeepMind1
- Electron Microscopy Data Bank1
- Electron density maps1
- Expression Atlas1
- Gene expression (gene-expression)1
- Genome annotations1
- Genome3D1
- Graph database1
- HMMER - protein homology search1
- InterProScan1
- Ligand binding sites1
- MetaboLights: Metabolomics repository and reference database1
- Molecular building blocks of life1
- Molecular structures1
- Molecular visualisation1
- NTDs1
- PDBe-KB1
- PDBeChem1
- PDBeFold1
- Pfam1
- Protein Data Bank in Europe - Knowledge Base1
- Protein classification1
- Protein domain prediction1
- Structural similarity1
- Structure prediction1
- Systems (systems)1
- chemical biology1
- host-pathogen1
- ligands1
- neglected topical diseases1
- protein structure1
- protein structure prediction1
- proteins1
- structure prediction1
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Scientific topic
- Bioinformatics705
- Genome annotation300
- Exomes291
- Genomes291
- Genomics291
- Personal genomics291
- Synthetic genomics291
- Viral genomics291
- Whole genomes291
- Biological modelling212
- Biological system modelling212
- Systems biology212
- Systems modelling212
- Biomedical research179
- Clinical medicine179
- Experimental medicine179
- General medicine179
- Internal medicine179
- Medicine179
- Data management156
- Metadata management156
- Research data management (RDM)156
- Bottom-up proteomics145
- Discovery proteomics145
- MS-based targeted proteomics145
- MS-based untargeted proteomics145
- Metaproteomics145
- Peptide identification145
- Protein and peptide identification145
- Proteomics145
- Quantitative proteomics145
- Targeted proteomics145
- Top-down proteomics145
- Cloud computing61
- Computer science61
- HPC61
- High performance computing61
- High-performance computing61
- Exometabolomics57
- LC-MS-based metabolomics57
- MS-based metabolomics57
- MS-based targeted metabolomics57
- MS-based untargeted metabolomics57
- Mass spectrometry-based metabolomics57
- Metabolites57
- Metabolome57
- Metabolomics57
- Metabonomics57
- NMR-based metabolomics57
- Immunology54
- Computational pharmacology53
- Pharmacoinformatics53
- Pharmacology53
- Comparative transcriptomics52
- Transcriptome52
- Transcriptomics52
- Biomathematics51
- Computational biology51
- Mathematical biology51
- Theoretical biology51
- FAIR data50
- Findable, accessible, interoperable, reusable data50
- Data archival49
- Data archiving49
- Data curation49
- Data curation and archival49
- Data preservation49
- Database curation49
- Research data archiving49
- Active learning46
- Ensembl learning46
- Kernel methods46
- Knowledge representation46
- Machine learning46
- Neural networks46
- Recommender system46
- Reinforcement learning46
- Supervised learning46
- Unsupervised learning46
- RNA-Seq analysis45
- Pipelines42
- Software integration42
- Tool integration42
- Tool interoperability42
- Workflows42
- Data visualisation39
- MicroRNA sequencing36
- RNA sequencing36
- RNA-Seq36
- Small RNA sequencing36
- Small RNA-Seq36
- Small-Seq36
- Transcriptome profiling36
- WTSS36
- Whole transcriptome shotgun sequencing36
- miRNA-seq36
- Metagenomics34
- Shotgun metagenomics34
- Data rendering32
- Protein databases31
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Country
- United Kingdom1
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Target audience
- El curso está dirigido para académicos de países latinoamericanos, que incluyen estudiantes de posgrados, postdocs e investigadores iniciando su carrera científica. En todos los casos, se prefiere que estén trabajando en metodologías moleculares para el estudio de enfermedades tropicales. Conocimiento en biología molecular es requerido, al igual que estar familiarizados con conceptos básicos en Bioinformática. Esperamos tener alrededor de 30 participantes de diferentes países latinoamericanos. Se alienta especialmente a participantes de grupos étnicos y de géneros subrepresentados a postularse para este curso. Tenga en cuenta que este curso se impartirá en español. Sin embargo, algunos de los formadores dominan el inglés y/o el portugués, por lo que se ofrecerá apoyo lingüístico cuando sea posible. Se dará prioridad de asistencia a aquellos que aún no hayan asistido a un evento de CABANA. 1
- This course is aimed at anyone interested in finding out more about protein biology. No prior experience of bioinformatics is required, but participants should have an undergraduate level understanding of biology. For those who wish to attend the sessions on programmatic access, prior knowledge of coding/programming would be of benefit. For an introduction to the concept of web services and how you can use them to access the tools and data available programmatically, please watch this EMBL-EBI, programatically webinar.1
- This course is aimed at scientists generating structural data or scientists utilising structural data in their analysis and/or interpretation. No previous experience in the field of structural bioinformatics is required, however a basic knowledge of protein structure would be of benefit.1
- This workshop is aimed at PhD students within the PhD programme "Genetics, Molecular and Cellular Biology" (University of Pavia) and the PhD programmme "Biomolecular Sciences and Biotechnology" (IUSS, University School for Advanced Studies Pavia. No knowledge of programming is required, but an undergraduate level knowledge of biology or molecular biology would be useful.1
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Instructor
- David Armstrong5
- James Tolchard3
- Typhaine Paysan-Lafosse3
- Gerard Kleywegt2
- Isabel Romero Calvo2
- Jan Kosinski2
- Janet Thornton2
- Kathryn Tunyasuvunakool2
- Mandar Deshpande2
- Michael Sternberg2
- Mihaly Varadi2
- Osman Salih2
- Preeti Choudhary2
- Rossana Zaru2
- Sara Rocio Chuguransky2
- Sreenath Nair2
- Abraham Espinoza Culupú1
- Adnan Malik1
- Adrián Turjanski1
- Alexandra Holinski1
- Alexandre Bonvin1
- Alexandre Bonvin1
- Anna Gaulton1
- Aurélien Luciani1
- Birgit Meldal1
- Dario Fernandez Do Porto1
- Deborah Harrus1
- Dina Schneidman1
- Eliot Ragueneau1
- Emily Perry1
- Ezgi Karaca1
- Fabio Madeira1
- Fabio Marques Madeira1
- Gustavo Sandoval1
- Hema Bye-A-Jee1
- Ian Sillitoe1
- Jack Turner1
- Jeanneth Mosquera1
- José Márquez1
- Juan Carlos Mobarec1
- Juri Rappsilber1
- Kalpana Paneerselvam1
- Kalpana Panneerselvam1
- Katja Luck1
- Keeva Cochrane1
- Krishna Kumar Tiwari1
- Kyle Morris1
- Laurent Dardenne1
- Leonie Anton1
- Marcelo Querino1
- Marisa Nicolas1
- Matt Higgins1
- Nancy George1
- Nancy Ontiveros1
- Nandana Madhusoodanan1
- Pablo Ivan Pereira Ramos1
- Pablo Smircich1
- Panagiotis L. Kastritis1
- Pedro Raposo1
- Piv Gopalasingam1
- Randy J Read1
- Randy J Read1
- Robbie Joosten1
- Rodrigo Ochoa1
- Rodrigo Vargas Honorato1
- Sara Chuguransky1
- Sergey Ovchinnikov1
- Sergey Ovchinnikov1
- Stephanie Lo1
- Thawfeek Varusai1
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