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• • Content provider
  • European Bioinformatics Institute (EBI)16
  • Australian BioCommons1
  • INB: Spanish National Bioinformatics Institute1
  • NBIS1
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• • Keyword
  • Protein Data Bank in Europe8
  • Structural biology8
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  • Proteins (proteins)6
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  • AlphaFold Database3
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• • Scientific topic
  • Bioinformatics741
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  • Biomedical research185
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  • Workshops and courses19
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• • Venue
  • , 9
  • European Bioinformatics Institute, Hinxton4
  • Kamenice 5, 5, Kamenice1
  • Onsite on three different locations across Sweden where the Swedish national Research Infrastructures, MaxIV, SciLifeLab and ESS are coming together to deliver a course on structural biology. The course will be held in Sweden, on site, between Aug 22 and Sept 2nd 2022. *Lund, 22 to 25 Aug *Gothenburg, 26 Aug *Stockholm, 29 Aug to 2 Sep1
  • Parador de Alcalá de Henares, 8, Calle Colegios1
  • University EAFIT, Carrera 49, número 7 sur 501
  • Università di Pavia, via Ferrata 11
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  • Alcalá de Henares1
  • Brno1
  • Lund, Gothenburg, Stockholm1
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  • United Kingdom4
  • Colombia1
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• • Sponsor
  • INB/ELIXIR-ES1
  • This InfraLife integrative structural biology course is organized with funding support from the Swedish research council, Lif, Excillum, NBIS, Xenocs, SwedNMR, Bruker and CryoNET.1
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• • Target audience
  • PhD students1
  • The course is open to scientists of all age from academia, health care and industry. Level approximately corresponding to PhD student or postdoc depending on experience. Applicants welcome from Sweden, the Nordics, and other countries.1
  • This course is aimed at researchers at any career stage within the University of Pavia and Institute of Molecular Genetics who are working with and/or generating their own genomic and biomolecular datasets. No knowledge of programming is required, but an undergraduate level knowledge of Biology / molecular biology would be beneficial.1
  • This course is aimed at wet-lab scientists generating structural data or scientists utilising structural data in their analysis and/or interpretation. No previous experience in the field of structural bioinformatics is required, however a basic knowledge of protein structure would be of benefit. Prerequisites  A working knowledge of the Linux operating system and ability to use the command line would be a benefit but is not mandatory. 1
  • This course is for biological researchers who want to learn more about the application of structural information in their work and how to use some of the key bioinformatics resources that are available. No previous experience in the field of structural bioinformatics is required, however a basic knowledge of protein structure would be of benefit. Participants should be familiar with basic Linux operations - http://www.ee.surrey.ac.uk/Teaching/Unix/ - and have some experience of bioinformatics tools and databases.1
  • This workshop is aimed at bioinformaticians with experience of analysing data from the PDB, either by processing archive files or via API access. We encourage applications from individuals with specific questions relating to PDB data that are difficult to solve using existing data queries. Programming experience is required, with a preference for those familiar with Python, although  this is not an absolute requirement. An example use case might involve research into a specific drug molecule, where protein structure is relevant to drug specificity. The graph database would allow the analysis of all common interaction sites in PDB at the residue level, with the potential to expand this search across ligands containing similar fragments. Additional searches could analyse the protein-protein interaction sites between different isoforms of the same protein, and cross-reference them to sequence conservation data and predicted functional annotations. Researchers should submit a 200-word abstract when they apply that describes their work and potential queries related to PDB data. This should include details on how PDB data has been accessed previously and the types of questions trying to be answered.1
  • This workshop is aimed at members and collaborators of the 3D-BioInfo Community.1
  • This workshop is suitable for academics of Latin American and Caribbean countries. Early career researchers, including graduate students, postdocs and professors working, or planning to start working in Structural Bioinformatics, are warmly encouraged to apply. Knowledge about molecular biology is required, as well as familiarity with basic bioinformatics concepts and undergraduate-level knowledge of protein structures. We expect to have around 20-25 participants from Colombia and other Latin American and Caribbean countries.    Please note this workshop will be delivered in English, however some of our trainers are fluent Spanish speakers and can offer support where needed.1
  • postdocs1
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• • Eligibility
  • First come first served2
  • Registration of interest1
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• • Node
  • EMBL-EBI16
  • Czech Republic1
  • Spain1
  • Sweden1
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• • Instructor
  • David Armstrong6
  • Gerard Kleywegt3
  • Alexandre Bonvin2
  • Anna Gaulton2
  • Christine Orengo2
  • Michael Sternberg2
  • Mihaly Varadi2
  • Osman Salih2
  • Rodrigo Vargas Honorato2
  • Sreenath Nair2
  • Typhaine Paysan-Lafosse2
  • Ajay Mishra1
  • Alex Bateman1
  • Andrew Martin1
  • Birgit Meldal1
  • Bálint Mészáros1
  • Carlos Muskus1
  • Deepti Gupta1
  • Erin Haskell1
  • Fabien Plisson1
  • Fabio Madeira1
  • Fabio Marques Madeira1
  • Franca Fraternali1
  • Ian Sillitoe1
  • Isabel Romero Calvo1
  • Isaias Lans1
  • James Stephenson1
  • Kathryn Tunyasuvakool1
  • Lawrence Kelley1
  • Lorna Richardson1
  • Lukas Pravda1
  • Madan Babu1
  • Pedro Beltrao1
  • Pedro Raposo1
  • Pilar Cossio1
  • Piraveen Gopalasingam1
  • Piv Gopalasingam1
  • Rob Finn1
  • Robbie Joosten1
  • Rodrigo Ochoa1
  • Rossana Zaru1
  • Sameer Velankar1
  • Sara Rocio Chuguransky1
  • Sergey Ovchinnikov1
  • Sjors Scheres1
  • Tom Hancocks1
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