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Keyword
- Proteins (proteins)15
- Protein Data Bank in Europe13
- UniProt: The Universal Protein Resource8
- AlphaFold Database6
- PDBe5
- Ensembl4
- InterPro4
- Structures (structures)4
- API3
- Ensembl Variant Effect Predictor3
- Genetic variants3
- Programmatic access3
- Reactome pathways database3
- AI2
- Artificial intelligence2
- ChEMBL: Bioactive data for drug discovery2
- Chemical biology (chemical-biology)2
- Complex Portal2
- Electron Microscopy Public Image Archive - EMPIAR2
- IntAct Molecular Interaction Database2
- small molecules2
- AI system1
- Aggregated view1
- ArrayExpress Archive of Functional Genomics Data1
- Chemical Entities of Biological Interest1
- DNA & RNA (dna-rna)1
- Data visualisation1
- DeepMind1
- Electron Microscopy Data Bank1
- Electron density maps1
- Expression Atlas1
- Gene expression (gene-expression)1
- Genome annotations1
- Genome3D1
- Graph database1
- HMMER - protein homology search1
- InterProScan1
- Ligand binding sites1
- MetaboLights: Metabolomics repository and reference database1
- Molecular building blocks of life1
- Molecular structures1
- Molecular visualisation1
- NTDs1
- PDBe-KB1
- PDBeChem1
- PDBeFold1
- Pfam1
- Protein Data Bank in Europe - Knowledge Base1
- Protein classification1
- Protein domain prediction1
- Structural similarity1
- Structure prediction1
- Systems (systems)1
- chemical biology1
- ligands1
- neglected topical diseases1
- protein structure prediction1
- proteins1
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Scientific topic
- Bioinformatics736
- Genome annotation322
- Exomes313
- Genomes313
- Genomics313
- Personal genomics313
- Synthetic genomics313
- Viral genomics313
- Whole genomes313
- Biological modelling219
- Biological system modelling219
- Systems biology219
- Systems modelling219
- Biomedical research185
- Clinical medicine185
- Experimental medicine185
- General medicine185
- Internal medicine185
- Medicine185
- Data management158
- Metadata management158
- Research data management (RDM)158
- Bottom-up proteomics153
- Discovery proteomics153
- MS-based targeted proteomics153
- MS-based untargeted proteomics153
- Metaproteomics153
- Peptide identification153
- Protein and peptide identification153
- Proteomics153
- Quantitative proteomics153
- Targeted proteomics153
- Top-down proteomics153
- Cloud computing61
- Computer science61
- HPC61
- High performance computing61
- High-performance computing61
- Exometabolomics58
- LC-MS-based metabolomics58
- MS-based metabolomics58
- MS-based targeted metabolomics58
- MS-based untargeted metabolomics58
- Mass spectrometry-based metabolomics58
- Metabolites58
- Metabolome58
- Metabolomics58
- Metabonomics58
- NMR-based metabolomics58
- Immunology56
- Computational pharmacology54
- Pharmacoinformatics54
- Pharmacology54
- Comparative transcriptomics53
- Transcriptome53
- Transcriptomics53
- Data archival52
- Data archiving52
- Data curation52
- Data curation and archival52
- Data preservation52
- Database curation52
- Research data archiving52
- Biomathematics51
- Computational biology51
- FAIR data51
- Findable, accessible, interoperable, reusable data51
- Mathematical biology51
- Theoretical biology51
- Pipelines46
- Software integration46
- Tool integration46
- Tool interoperability46
- Workflows46
- Active learning45
- Ensembl learning45
- Kernel methods45
- Knowledge representation45
- Machine learning45
- Neural networks45
- RNA-Seq analysis45
- Recommender system45
- Reinforcement learning45
- Supervised learning45
- Unsupervised learning45
- Data visualisation39
- MicroRNA sequencing36
- RNA sequencing36
- RNA-Seq36
- Small RNA sequencing36
- Small RNA-Seq36
- Small-Seq36
- Transcriptome profiling36
- WTSS36
- Whole transcriptome shotgun sequencing36
- miRNA-seq36
- Metagenomics34
- Shotgun metagenomics34
- Data rendering32
- High-throughput sequencing31
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Country
- United Kingdom1
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Target audience
- El curso está dirigido para académicos de países latinoamericanos, que incluyen estudiantes de posgrados, postdocs e investigadores iniciando su carrera científica. En todos los casos, se prefiere que estén trabajando en metodologías moleculares para el estudio de enfermedades tropicales. Conocimiento en biología molecular es requerido, al igual que estar familiarizados con conceptos básicos en Bioinformática. Esperamos tener alrededor de 30 participantes de diferentes países latinoamericanos. Se alienta especialmente a participantes de grupos étnicos y de géneros subrepresentados a postularse para este curso. Tenga en cuenta que este curso se impartirá en español. Sin embargo, algunos de los formadores dominan el inglés y/o el portugués, por lo que se ofrecerá apoyo lingüístico cuando sea posible. Se dará prioridad de asistencia a aquellos que aún no hayan asistido a un evento de CABANA. 1
- This course is aimed at anyone interested in finding out more about protein biology. No prior experience of bioinformatics is required, but participants should have an undergraduate level understanding of biology. For those who wish to attend the sessions on programmatic access, prior knowledge of coding/programming would be of benefit. For an introduction to the concept of web services and how you can use them to access the tools and data available programmatically, please watch this EMBL-EBI, programatically webinar.1
- This course is aimed at scientists generating structural data or scientists utilising structural data in their analysis and/or interpretation. No previous experience in the field of structural bioinformatics is required, however a basic knowledge of protein structure would be of benefit.1
- This workshop is aimed at PhD students within the PhD programme "Genetics, Molecular and Cellular Biology" (University of Pavia) and the PhD programmme "Biomolecular Sciences and Biotechnology" (IUSS, University School for Advanced Studies Pavia. No knowledge of programming is required, but an undergraduate level knowledge of biology or molecular biology would be useful.1
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Instructor
- David Armstrong5
- James Tolchard3
- Typhaine Paysan-Lafosse3
- Gerard Kleywegt2
- Isabel Romero Calvo2
- Janet Thornton2
- Kathryn Tunyasuvunakool2
- Mandar Deshpande2
- Michael Sternberg2
- Mihaly Varadi2
- Osman Salih2
- Preeti Choudhary2
- Rossana Zaru2
- Sara Rocio Chuguransky2
- Sreenath Nair2
- Abraham Espinoza Culupú1
- Adnan Malik1
- Adrián Turjanski1
- Alexandra Holinski1
- Alexandre Bonvin1
- Alexandre Bonvin1
- Anna Gaulton1
- Aurélien Luciani1
- Birgit Meldal1
- Dario Fernandez Do Porto1
- Deborah Harrus1
- Dina Schneidman1
- Eliot Ragueneau1
- Emily Perry1
- Ezgi Karaca1
- Fabio Madeira1
- Fabio Marques Madeira1
- Gustavo Sandoval1
- Hema Bye-A-Jee1
- Ian Sillitoe1
- Jack Turner1
- Jan Kosinski1
- Jeanneth Mosquera1
- Juan Carlos Mobarec1
- Juri Rappsilber1
- Kalpana Paneerselvam1
- Kalpana Panneerselvam1
- Katja Luck1
- Keeva Cochrane1
- Krishna Kumar Tiwari1
- Laurent Dardenne1
- Marisa Nicolas1
- Nancy George1
- Nancy Ontiveros1
- Nandana Madhusoodanan1
- Pablo Ivan Pereira Ramos1
- Pablo Smircich1
- Panagiotis L. Kastritis1
- Pedro Raposo1
- Piv Gopalasingam1
- Randy J Read1
- Randy J Read1
- Robbie Joosten1
- Rodrigo Ochoa1
- Rodrigo Vargas Honorato1
- Sara Chuguransky1
- Sergey Ovchinnikov1
- Sergey Ovchinnikov1
- Thawfeek Varusai1
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