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Tutorial
Development in Galaxy - Tool Dependencies and Conda
Galaxy is an open-source project. Everyone can contribute to its development with core Galaxy development, integration of softwares in Galaxy environment, ...
Questions of the tutorial:
- How can I connect tools to applications and libraries?
- What are the advantages of declaring dependencies for my tool?
- What are Conda and Bioconda?
- What are Conda recipes and environments?
- How do I find and use existing Conda recipes?
- How do I develop Conda recipes for use within Galaxy tools?
Objectives of the tutorial:
- Learn to use existing Conda recipes to enable best practice tool dependency management in Galaxy.
- Learn the basics of building Conda recipes and contributing to Bioconda.
- Learn to use Planemo to assist in developing Galaxy tools from existing and new Conda recipes.
Resource type: Tutorial
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