e-learning
Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
Abstract
In this HiCExplorer tutorial we will generate and plot a Hi-C contact matrix.
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- Why is a Hi-C analysis useful?
- What is 'chromosome conformation capture'?
- What are main steps in order to generate and plot a Hi-C contact matrix?
Licence: Creative Commons Attribution 4.0 International
Keywords: Epigenetics
Competency level: • Beginner
Target audience: Students
Resource type: e-learning
Version: 31
Status: Active
Prerequisites:
- Introduction to Galaxy Analyses
- Mapping
- Quality Control
Date modified: 2026-03-16
Date published: 2018-02-23
Contributors: Joachim Wolff, Mehmet Tekman, Niall Beard, Torsten Houwaart, 
Anup Kumar, Björn Grüning, Bérénice Batut, Helena Rasche, Nicola Soranzo, Saskia Hiltemann, Tristan Reynolds
Scientific topics: Epigenomics
External resources:
Activity log
