e-learning
SAM3 – AI-based Semantic Segmentation of marine biodiversity Images and Videos
Abstract
This tutorial will guide you through using the {% tool SAM3 %} (Segment Anything Model 3) tool on Galaxy. SAM3 can automatically detect and segment objects in images or videos using text prompts, with no specific training required.
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- How can you automatically segment marine biodiversity objects in images or videos using a simple text prompt?
Learning Objectives
- Segment marine animals in a photograph and/or video using a text prompt
Licence: Creative Commons Attribution 4.0 International
Keywords: AI segmentation, Biodiversity, Ecology, Marine ecosystems
Target audience: Students
Resource type: e-learning
Version: 3
Status: Active
Prerequisites:
Introduction to Galaxy Analyses
Learning objectives:
- Segment marine animals in a photograph and/or video using a text prompt
Date modified: 2026-05-12
Date published: 2026-05-07
Authors: Arthur Barreau, 
Yvan Le Bras, Nadine Le Bris
Contributors: Pauline Seguineau, Kevin Payet, Marie Josse, Arthur Barreau, Saskia Hiltemann, Yvan Le Bras
Scientific topics: Ecology, Biodiversity
Activity log
