Training materials
46 materials found
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Presentation, Video
E-PAN Workshop 2026 | Enhancing Pan-Genome Analysis in Plants
• BeginnerPlant biology Genomics FAIR data Pangenome Visualization Quality Control Data sharing plant science -
Training materials, Course materials
Linux commands and Genomics data formats for biologists
• BeginnerGenomics Bioinformatics FASTA FASTQC GTF ChIP-Seq Genome browser -
e-learning
Phylogenetic analysis for bacterial comparative genomics
• BeginnerEvolutionary biology Genomics Microbiology Phylogeny Evolution microgalaxy work-in-progress -
e-learning
Bacterial genome quality control
• BeginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
e-learning
Dataset construction for bacterial comparative genomics
• BeginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
e-learning
Bacterial pangenomics
• BeginnerGenomics Microbiology Genome Annotation -
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• BeginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome -
e-learning
Decontamination of a genome assembly
• BeginnerSequence assembly Genomics Biodiversity Assembly biodiversity -
e-learning
Assembly of the mitochondrial genome from PacBio HiFi reads
• BeginnerSequence assembly Genomics Biodiversity Mitochondria Assembly biodiversity -
Tutorial, Training materials, Bioinformatics
How to use REPET software for de novo annotation of transposable elements in genomes
• BeginnerGenomics Structural variation Bioinformatics Genome annotation Sequence classification Transposons Annotation Pipelines Docker