Training materials
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Ensuring More Accurate, Generalisable, and Interpretable Machine Learning Models for Bioinformatics
•• Intermediate -
youtube video, Series of videos, slideck/ presentation, tutorials
7th Advanced in silico Drug Design workshop lectures
•• IntermediateDrug discovery Computational biology Computational chemistry Molecular modelling Molecular dynamics Pharmacology Proteins in silico drug design, Drug design, Drug discovery, Drug screening, pharmacophore, chemical biology, QSAR, Molecular docking, molecular modelling, PDBe, PDBe-KB, ChEMBL, De novo, deep learning, cheminformatics, AlphaFold, Quantum mechanics/molecular mechanics -
Course materials
GeneBridge: Inferring the Evolutionary Rooting of Orthologous Genes
•• IntermediateEvolutionary biology Systems biology orthology Evolutionary bioinformatics Systems biology -
Video
Biodiversity Genomics Europe + SciLifeLab HiC Course
•• IntermediateHiC Genome Assembly Genome Sequencing Epigenomics Laboratory Technique -
Tutorial
Glycoproteomics with FragPipe
•• IntermediatePeptide database search Peptide identification glycomics glycoproteomics Mass spectrometry -
Video
Protein Prospector: Glycopeptide Analysis using MS-Filter with Glycan Scoring
•• IntermediatePeptide identification Peptide database search glycoproteomics Mass spectrometry -
e-learning
Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools
•• IntermediateImaging Conversion Imaging Multi-channel image Object feature extraction ROI selection -
e-learning
Training Custom YOLO Models for Segmentation of Bioimages
•• IntermediateImaging Deep learning Image annotation Image segmentation Imaging -
hands-on tutorial, E-Learning
RNA-seq | From Counts 2 Biological Insights
•• IntermediateMolecular genetics Gene expression Transcriptomics RNA-Seq RNA-Seq bulk mouse Quality Control PCA Functional enrichment … -
e-learning
Comparison of two annotation tools - Helixer and Braker3
•• IntermediateGenomics Sequence assembly Braker3 Genome Annotation Helixer biodiversity eukaryota jbrowse1