Training materials
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e-learning
Genomic Data Visualisation with JBrowse2
•• IntermediateVisualisation gmod jbrowse2 -
e-learning
Gleam Multimodal Learner - Head and Neck cancer Recurrence Prediction with HANCOCK
•• IntermediateStatistics and probability GLEAM HANCOCK Dataset Multimodal Learning Recurrence Prediction Statistics and machine learning -
e-learning
Content Tracking and Verification in Galaxy Workflows with ISCC-SUM
•• IntermediateImaging Data handling Data management Data sharing Imaging Validation -
e-learning
Execute a BiaPy workflow in Galaxy
•• IntermediateImaging 3D image Conversion Deep learning Image annotation Image segmentation Imaging Overlay Volume rendering -
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DES RAP Book: Reproducible Discrete-Event Simulation in Python and R
•• IntermediateComputer science Data visualisation Data management FAIR data Informatics Open science Statistics and probability Version control Workflows Automated testing … -
e-learning
GLEAM Image Learner - Validating Skin Lesion Classification on HAM10000
•• IntermediateStatistics and probability Deep Learning HAM10000 Dataset Image Classification Image Learner Skin Lesion Classification Statistics and machine learning -
e-learning
Galaxy Tabular Learner - Building a Model using Chowell clinical data
•• IntermediateStatistics and probability LORIS Score Model Machine Learning Statistics and machine learning Tabular Learner -
e-learning
Building and Annotating Metagenome-Assembled Genomes (MAGs) from Short Metagenomics Paired Reads
•• IntermediateMetagenomics Microbial ecology Sequence assembly Microbiome assembly binning metagenomics microgalaxy -
e-learning
Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools
•• IntermediateImaging Conversion Imaging Multi-channel image Object feature extraction ROI selection -
e-learning
Training Custom YOLO Models for Segmentation of Bioimages
•• IntermediateImaging Deep learning Image annotation Image segmentation Imaging