Materials - TeSS (Training eSupport System)

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- Scientific topic
- Exomes121
- Genome annotation121
- Genomes121
- Genomics121
- Personal genomics121
- Synthetic genomics121
- Viral genomics121
- Whole genomes121
- Chromosome walking34
- Clone verification34
- DNA-Seq34
- DNase-Seq34
- High throughput sequencing34
- High-throughput sequencing34
- NGS34
- NGS data analysis34
- Next gen sequencing34
- Next generation sequencing34
- Panels34
- Primer walking34
- Sanger sequencing34
- Sequencing34
- Targeted next-generation sequencing panels34
- Breakend assembly20
- Genome assembly20
- Genomic assembly20
- MicroRNA sequencing20
- RNA sequencing20
- RNA-Seq20
- RNA-Seq analysis20
- Sequence assembly (genome assembly)20
- Small RNA sequencing20
- Small RNA-Seq20
- Small-Seq20
- Transcriptome profiling20
- Variant pattern analysis20
- WTSS20
- Whole transcriptome shotgun sequencing20
- miRNA-seq20
- Comparative transcriptomics17
- Transcriptome17
- Transcriptomics17
- Functional genome annotation12
- Metagenome annotation12
- Structural genome annotation12
- Comparative genomics9
- Sequence read processing9
- DNA methylation7
- Data rendering7
- Data visualisation7
- Epigenetics7
- Histone modification7
- Methylation profiles7
- Genetic variation analysis6
- Genetic variation annotation6
- Metagenomics6
- Sequence variation analysis6
- Shotgun metagenomics6
- Single-cell genomics6
- Single-cell sequencing6
- Transcript variant analysis6
- Variant analysis6
- Bayesian methods5
- Biostatistics5
- Descriptive statistics5
- Gaussian processes5
- Inferential statistics5
- Markov processes5
- Multivariate statistics5
- Population genetics5
- Probabilistic graphical model5
- Probability5
- Statistics5
- Statistics and probability5
- ChIP-exo4
- ChIP-seq4
- ChIP-sequencing4
- Chip Seq4
- Chip sequencing4
- Chip-sequencing4
- Epidemiology4
- Public health4
- Public health and epidemiology4
- Active learning3
- Algorithms3
- Computer programming3
- Content management3
- Data structures3
- Database management3
- Document management3
- Ensembl learning3
- File management3
- Integrative omics3
- Kernel methods3
- Knowledge representation3
- Machine learning3
- Multi-omics3
- Multiomics3
- Neural networks3
- Pan-omics3
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- Standard database or policy
- Genomics England | PanelApp1
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- Content provider
- Glittr.org77
- ERGA Knowledge Hub41
- Australian BioCommons14
- Centre for Genomic Regulation (CRG)3
- GOBLET2
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- Keyword
- Genomics
- R307
- Python125
- Transcriptomics118
- Next generation sequencing115
- RNA-seq112
- Bioinformatics82
- Data management82
- Statistics75
- Machine learning65
- Data science64
- Single-cell sequencing59
- Unix/Linux59
- Reproducibility56
- FAIR data55
- Variant analysis48
- Data visualization46
- Version control46
- Workflows44
- Genome assembly41
- General36
- Genome annotation36
- Metagenomics32
- Genome28
- Molecular28
- FAIR27
- Long read sequencing26
- Nextflow26
- data management24
- Containerization22
- Microbiology22
- Shiny21
- Spatial transcriptomics21
- Docker20
- RDM20
- sensitive data19
- CfRR19
- High performance computing19
- Phylogenetics19
- REDCap19
- programming19
- reproducible research19
- scientific computing19
- Comparative genomics18
- life-sciences18
- Artificial intelligence17
- Galaxy17
- ChIP-seq16
- Cloud computing15
- Anatomy Physiology and Atlases14
- Quarto14
- Epigenetics13
- Image analysis13
- Pathways and Networks13
- Proteomics13
- Shell13
- ATAC-seq12
- Enrichment analysis12
- Europe PMC12
- Introduction12
- bioinformatics12
- health-informatics12
- metadata12
- Analysis11
- Cells and Organisms11
- Introduction bioinformatics11
- Multiomics11
- Pathway11
- Programming11
- Rmarkdown11
- plant phenotyping11
- Extras10
- Julia10
- Literature search10
- Singularity10
- Snakemake10
- databases10
- Deep learning9
- Epidemiology9
- FAIRsharing9
- Python biologists9
- REMBI9
- computer-science9
- metagenomics9
- policies9
- standards9
- Database Management8
- Git8
- Inferential statistics8
- PDBe8
- Population genetics8
- Populations8
- Regex8
- Science Communication8
- Systems biology8
- algorithms8
- Biomedical Literature7
- Data submission7
- Information visualisation7
- Intro7
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- Competency level
- Not specified
- Intermediate5
- Beginner3
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- Licence
- License Not Specified78
- Creative Commons Attribution 4.0 International33
- MIT License12
- GNU General Public License v3.0 only11
- Creative Commons Zero v1.0 Universal4
- Creative Commons Attribution Non Commercial 4.0 International1
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- Target audience
- Life Science Researchers2
- Researchers2
- Clinical Scientists1
- Data Access Committeses from the EGA1
- Master students1
- Professors1
- Researchers and bioinformaticians in other projects interested in depositiong data at the EGA1
- Researchers and bioinformaticians involved in the VEIS project1
- clinicians and informaticians interested in cancer genetics1
- healthcare professionals1
- postgrad1
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- Author
- Data Carpentry6
- bioinformatics.ca6
- The Gulbenkian Training Programme in Bioinformatics4
- Canadian Bioinformatics Workshops3
- NBIS - National Bioinformatics Infrastructure Sweden3
- SIB Swiss Institute of Bioinformatics3
- Bioinformatics, Rockefeller University2
- Boas Pucker2
- Ihsan, Maira2
- Nelson, Tiffanie2
- Paupério, Joana2
- The Carpentries Lab2
- Alli Black1
- Andries Marees1
- Applied Genomics1
- Baker, Naomi1
- Barugahare, Adele1
- Biocore@CRG1
- Biodiversity Genomics Academy 20231
- BiotrAIn1
- Bretaudeau, Anthony1
- CRUK CI Bioinformatics Core1
- Celia van Gelder1
- Computational Genomics with R1
- Computational Metagenomics1
- Degnan, Bernie1
- Degnan, Sandie1
- Deshpande, Nandan1
- Dipannita Ghosh1
- Ellen McDonagh1
- Eric C. Anderson1
- Fred Hutch Data Science Lab1
- Freeberg, Mallory1
- Functional Genomics Laboratory1
- Galaxy Project1
- Hall, Grace1
- Harrison, Paul1
- Hofmann, Oliver1
- Hogg, Carolyn1
- Holliday, Jess1
- IB-ULFRI1
- Jan Paces1
- Jan Taylor1
- Katharina Hoff1
- Kristyna Kupkova1
- Kummerfeld, Sarah1
- Lee, Justin1
- Leonardo Collado-Torres1
- Mahul Chakraborty1
- Makunin, Igor1
- Melbourne Bioinformatics1
- Mike Lee1
- Morgan, Steven1
- Nanopore for Educators1
- Nauheimer, Lars1
- Nina Overgaard Therkildsen1
- Nisselle, Amy1
- Oslo Centre for Biostatistics and Epidemiology1
- Pachter Lab1
- Papenfuss Lab1
- Patterson, Andrew1
- Perry, Andrew1
- Pope, Bernie1
- Python club at University of Algarve1
- Rane, Rahul1
- Raphael Mourad1
- Rasche, Helena1
- Reames, Benjamin1
- Rebecca Foulger1
- Rob Waterhouse1
- SLU Global Bioinformatics Centre1
- Schmidt-Lebuhn, Alexander1
- SciLifeLab-Training1
- St. Jude Children's Research Hospital1
- Stephen Turner1
- Steven M. Van Belleghem1
- Syed, Mustafa1
- Taouk, Kamile1
- Taylor, Mark1
- Teaching materials at the Harvard Chan Bioinformatics Core1
- Thang, Mike1
- The Griffith Lab1
- The McDonnell Genome Institute1
- Vissers, Joep1
- Voelker, Julia1
- Wellcome Connecting Science1
- Williams, Sarah1
- Wong, Nick1
- Wong-Erasmus, Marie1
- cambiotraining1
- genomicsclass1
- gladstone-institutes1
- liulab-dfci1
- nour08101
- nullranges1
- rapidspeciation1
- zemZemTrainingOrg1
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- Contributor
- Canadian Bioinformatics Workshops8
- Erin Becker8
- François Michonneau8
- Toby Hodges8
- maneesha8
- Jason Williams7
- Tracy Teal7
- Zhian N. Kamvar7
- Bianca Peterson6
- C. Titus Brown6
- Taylor Reiter6
- Amanda Charbonneau5
- Dan Kerchner5
- Mark Fernandes5
- Rayna M Harris5
- Robert Davey5
- Anita Schürch4
- Nelly Sélem4
- Pete4
- Sarah Stevens4
- The Gulbenkian Training Programme in Bioinformatics4
- Annajiat Alim Rasel3
- Bob Freeman3
- Brittany N. Lasseigne, PhD3
- Bérénice Batut3
- David Pérez-Suárez3
- Fotis E. Psomopoulos3
- Hilmar Lapp3
- JCSzamosi3
- Jemma Stachelek3
- Kari L. Jordan, PhD3
- Katrin Leinweber3
- Michael R. Crusoe3
- Naupaka Zimmerman3
- Niclas Jareborg3
- Paula Andrea Martinez3
- Sam Nooij3
- Sarah Brown3
- murraycadzow3
- zhibinlu3
- Aaron E. Jaime2
- Abby Cabunoc Mayes2
- AbrahamAvelar2
- Ahmed Moustafa2
- Alana Alexander2
- Allen Lee2
- Andrew Sanchez2
- Andy Boughton2
- Aziz Khan2
- Boas Pucker2
- Brandon Curtis2
- Charlie Barclay2
- Chris Miller2
- Christina K.2
- CladoniaRang2
- Clara2
- Claudia Zirión Martínez2
- Darian2
- David Mawdsley2
- Dinindu Senanayake2
- EWheeler1232
- Edmund Miller2
- Erik Garrison2
- EvanWill2
- Finlay Maguire2
- Flavio Lombardo2
- Gabriel A. Devenyi2
- Geert van Geest2
- Graeme Grimes2
- Hadrien Gourlé2
- Ian Lee2
- Idowu Olawoye2
- J. Abel Lovaco2
- Jacques Dainat2
- Jared Simpson2
- Jeff Oliver2
- JesseKerkvliet2
- Joel Nothman2
- Jon Pipitone2
- Jonah Duckles2
- Karen Cranston2
- Karen Word2
- Kartik Singhal2
- Katie Anne Mills2
- Kelsy Cotto2
- Kevin Weitemier2
- Lex Nederbragt2
- M. Foos2
- Mariam Khanfar2
- Mateusz Kuzak2
- Matt Paul2
- Matthew Kweskin2
- Maxim Belkin2
- Michael Hansen2
- Michael Love2
- Miguel Cardoso2
- Ming Tang2
- My Hoang2
- Nick Young2
- Piotr Banaszkiewicz2
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- Resource type
- Video3
- Presentation2
- knowledgebase1
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- Related resource
- Beacon v2: a discovery tool for genomic and pheno-clinical data1
- DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- EGA Submitter Portal Tutorial1
- GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Genomics England PanelApp1
- Introduction to the EGA and sharing sensitive data1
- Slides | Beacon v2: a discovery tool for genomic and pheno-clinical data1
- Slides | DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- Slides | GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Slides | Introduction to the EGA and sharing sensitive data1
- VEIS webinar: The essentials of DUO codes | Presentation1
- VEIS webinar: The essentials of DUO codes | Video1
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- Node
- Switzerland118
- Spain3
- Czech Republic1
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- Collection
- ELIXIR Federated Human Data Community3
- VEIS - Value of the EGA for Industry and Society3
- ELIXIR Biodiversity Community1
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- Status
- Active15
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