Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Comparative transcriptomics12
    • Transcriptome12
    • Transcriptomics12
    • Chromosome walking5
    • Clone verification5
    • DNA-Seq5
    • DNase-Seq5
    • High throughput sequencing5
    • High-throughput sequencing5
    • MicroRNA sequencing5
    • NGS5
    • NGS data analysis5
    • Next gen sequencing5
    • Next generation sequencing5
    • Panels5
    • Primer walking5
    • RNA sequencing5
    • RNA-Seq5
    • RNA-Seq analysis5
    • Sanger sequencing5
    • Sequencing5
    • Small RNA sequencing5
    • Small RNA-Seq5
    • Small-Seq5
    • Targeted next-generation sequencing panels5
    • Transcriptome profiling5
    • WTSS5
    • Whole transcriptome shotgun sequencing5
    • miRNA-seq5
    • Single-cell genomics3
    • Single-cell sequencing3
    • Active learning2
    • Ensembl learning2
    • Kernel methods2
    • Knowledge representation2
    • Machine learning2
    • Neural networks2
    • R2
    • R program2
    • R script2
    • Recommender system2
    • Reinforcement learning2
    • Supervised learning2
    • Unsupervised learning2
    • Bayesian methods1
    • Biostatistics1
    • Botany1
    • ChIP-exo1
    • ChIP-seq1
    • ChIP-sequencing1
    • Chip Seq1
    • Chip sequencing1
    • Chip-sequencing1
    • Content management1
    • DNA methylation1
    • Data analysis1
    • Data architecture1
    • Data architecture, analysis and design1
    • Data design1
    • Database management1
    • Descriptive statistics1
    • Document management1
    • Epigenetics1
    • Exomes1
    • File management1
    • Functional genome annotation1
    • Gaussian processes1
    • Genome annotation1
    • Genomes1
    • Genomics1
    • Genotype1
    • Genotype and phenotype1
    • Genotype and phenotype resources1
    • Genotype-phenotype1
    • Genotype-phenotype analysis1
    • Genotyping1
    • Histone modification1
    • Image analysis1
    • Inferential statistics1
    • Markov processes1
    • Metagenome annotation1
    • Methylation profiles1
    • Multivariate statistics1
    • Personal genomics1
    • Phenotype1
    • Phenotyping1
    • Plant1
    • Plant anatomy1
    • Plant biology1
    • Plant cell biology1
    • Plant ecology1
    • Plant genetics1
    • Plant physiology1
    • Plant science1
    • Plants1
    • Probabilistic graphical model1
    • Probability1
    • Record management1
    • Statistics1
    • Statistics and probability1
    • Show N_FILTERS more
    • Content provider
    • Glittr.org20
    • European Bioinformatics Institute (EBI)1
    • Show N_FILTERS more
    • Keyword
    • Spatial transcriptomics
    • R307
    • Genomics139
    • Python125
    • Transcriptomics118
    • Next generation sequencing115
    • RNA-seq112
    • Bioinformatics82
    • Data management82
    • Statistics75
    • Machine learning65
    • Data science64
    • Single-cell sequencing59
    • Unix/Linux59
    • Reproducibility56
    • FAIR data55
    • Variant analysis48
    • Data visualization46
    • Version control46
    • Workflows44
    • Genome assembly41
    • General36
    • Genome annotation36
    • Metagenomics32
    • Genome28
    • Molecular28
    • FAIR27
    • Long read sequencing26
    • Nextflow26
    • data management24
    • Containerization22
    • Microbiology22
    • Shiny21
    • Docker20
    • RDM20
    • sensitive data19
    • CfRR19
    • High performance computing19
    • Phylogenetics19
    • REDCap19
    • programming19
    • reproducible research19
    • scientific computing19
    • Comparative genomics18
    • life-sciences18
    • Artificial intelligence17
    • Galaxy17
    • ChIP-seq16
    • Cloud computing15
    • Anatomy Physiology and Atlases14
    • Quarto14
    • Epigenetics13
    • Image analysis13
    • Pathways and Networks13
    • Proteomics13
    • Shell13
    • ATAC-seq12
    • Enrichment analysis12
    • Europe PMC12
    • Introduction12
    • bioinformatics12
    • health-informatics12
    • metadata12
    • Analysis11
    • Cells and Organisms11
    • Introduction bioinformatics11
    • Multiomics11
    • Pathway11
    • Programming11
    • Rmarkdown11
    • plant phenotyping11
    • Extras10
    • Julia10
    • Literature search10
    • Singularity10
    • Snakemake10
    • databases10
    • Deep learning9
    • Epidemiology9
    • FAIRsharing9
    • Python biologists9
    • REMBI9
    • computer-science9
    • metagenomics9
    • policies9
    • standards9
    • Database Management8
    • Git8
    • Inferential statistics8
    • PDBe8
    • Population genetics8
    • Populations8
    • Regex8
    • Science Communication8
    • Systems biology8
    • algorithms8
    • Biomedical Literature7
    • Data submission7
    • Information visualisation7
    • Intro7
    • Show N_FILTERS more
    • Competency level
    • Not specified
    • Show N_FILTERS more
    • Licence
    • License Not Specified13
    • Creative Commons Attribution 4.0 International5
    • MIT License2
    • GNU General Public License v3.0 only1
    • Show N_FILTERS more
    • Target audience
    • Clinicians1
    • PhD students1
    • Show N_FILTERS more
    • Author
    • Lukas Weber3
    • SIB Swiss Institute of Bioinformatics2
    • bioinformatics.ca2
    • Boston University1
    • BrainOmicsCourse1
    • Davis Laboratory1
    • ELIXIR Europe Training1
    • Estella Yixing Dong1
    • Fred Hutch Data Science Lab1
    • Integrative Computational Biology and Multiomics Research Group1
    • Mahfouz Lab1
    • NBIS - National Bioinformatics Infrastructure Sweden1
    • Sydney Precision Data Science Centre1
    • UC Davis Bioinformatics Core Training Page1
    • dario righelli1
    • juexinwang1
    • robinsonlabuzh1
    • Show N_FILTERS more
    • Contributor
    • Lukas Weber4
    • Benedetta Manzato3
    • CATALYST-project3
    • Geert van Geest3
    • Mark Robinson3
    • Martin Emons3
    • Canadian Bioinformatics Workshops2
    • Estella Yixing Dong2
    • Julien Roux2
    • Peiying Cai2
    • Samuel Gunz2
    • ahmedmahfouz2
    • Ahmed Mohamed1
    • Alessia Valenti1
    • Alex Qin1
    • Alexandru Mahmoud1
    • Anna Schaar1
    • Artür Manukyan1
    • Boston University1
    • Boyi Guo1
    • Callum Sargeant1
    • Candace Savonen1
    • Carrie Wright1
    • Chloe Herman1
    • Christophe Avenel1
    • Claudio Novella Rausell1
    • Cristina Cheroni1
    • Davide Castaldi1
    • Davide Risso1
    • Deepak Tanwar1
    • Eduard Chelebian1
    • Ellis Patrick1
    • Emanuele Villa1
    • Farhan Ameen1
    • Francesca Drummer1
    • Gaja Matassa1
    • Giovanni Palla1
    • Hannah Lyman1
    • Hannah Spitzer1
    • HeidiLischer1
    • Helena L. Crowell1
    • Ilaria Billato1
    • Izaskun Mallona1
    • Jcarlevaro1
    • Jieran S.1
    • Kate Isaac1
    • Lori (Shepherd) Kern1
    • Marco1
    • Michael Totty1
    • Ning Liu1
    • Pratibha Panwar1
    • Rasool Saghaleyni1
    • Sengels241
    • Shreya Rao1
    • Simon Cockell1
    • Willem1
    • Ye Zheng1
    • actions-user1
    • cmills21
    • dario righelli1
    • geogav1
    • jhudsl-robot1
    • juexinwang1
    • ludvb1
    • mbaardwijk1
    • niklasmueboe1
    • oospina1
    • retogerber1
    • sebastiantiesmeyer1
    • sergiomarco251
    • wperlichek1
    • zhibinlu1
    • Show N_FILTERS more
    • Resource type
    • e-learning1
    • Show N_FILTERS more
    • Node
    • Switzerland20
    • EMBL-EBI1
    • Show N_FILTERS more
  • Only show materials from current space
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Competency level: Not specified

and Across all spaces: true

and Keywords: Spatial transcriptomics

21 materials found
  • bioinformaticsdotca/ISO_2024

    ELIXIR node event
    Spatial transcriptomics
  • bioinformaticsdotca/ISO-V_2025

    ELIXIR node event
    Spatial transcriptomics
  • robinsonlabuzh/pasta

    ELIXIR node event
    Statistics and probability Statistics R Spatial transcriptomics
  • sib-swiss/seq-spatial-transcriptomics-training

    ELIXIR node event
    Sequencing Transcriptomics RNA-Seq Spatial transcriptomics Next generation sequencing Transcriptomics RNA-seq
  • mahfouzlab/MGC-BioSB-Spatial-Omics-Analysis-2025

    ELIXIR node event
    Spatial transcriptomics
  • juexinwang/Tutorial_ISMB2024

    ELIXIR node event
    Machine learning Single-cell sequencing Machine learning Artificial intelligence Single-cell sequencing Spatial transcriptomics
  • estellad/BC2_Spatial_Transcriptomics

    ELIXIR node event
    R script Spatial transcriptomics R
  • lmweber/OSTA

    ELIXIR node event
    R script Spatial transcriptomics R
  • elixir-europe-training/ELIXIR-SCO-spatial-omics

    ELIXIR node event
    Transcriptomics Image analysis Spatial transcriptomics Transcriptomics Image analysis
  • BrainOmicsCourse/BrainOmics2024

    ELIXIR node event
    Transcriptomics Single-cell sequencing RNA-Seq Transcriptomics Single-cell sequencing Spatial transcriptomics RNA-seq
  • 1
  • 2
  • 3
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.