Materials - TeSS (Training eSupport System)

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- Scientific topic
- Genome annotation160
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- Exomes139
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- MicroRNA sequencing117
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- Small RNA-Seq117
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- WTSS117
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- miRNA-seq117
- Data management105
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- Chromosome walking103
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- DNA-Seq103
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- Bayesian methods78
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- Single-cell genomics59
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- Data rendering48
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- Metagenomics40
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- Breakend assembly38
- Genome assembly38
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- Sequence assembly (genome assembly)38
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- Pipelines36
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- Antimicrobial stewardship33
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- Microbial genetics33
- Microbial physiology33
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- Microbiology33
- Molecular infection biology33
- Molecular microbiology33
- Structural genome annotation33
- Bioinformatics30
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- Operation
- Data brokering1
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- Bioconductor23
- REDCap19
- BridgeDb3
- MGnify (was EBI Metagenomics)3
- Data Stewardship Wizard2
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- CARNIVAL1
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- RCy31
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- Standard database or policy
- NCBI Gene4
- DisProt2
- BRENDA1
- BridgeDb1
- Ensembl1
- FAIRsharing1
- Genomics England | PanelApp1
- HumanMine1
- Integrated resource of protein families, domains and functional sites1
- Observational Medical Outcomes Partnership Standard Vocabulary1
- PRINTS1
- RDA DMP Common Standard for Machine-Actionable Data Management Plans1
- Stress Knowledge Map1
- The FAIR Principles1
- The Observational Medical Outcomes Partnership Common Data Model1
- WorkflowHub1
- i2b2-patient_visit_dimensions1
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- Content provider
- Glittr.org809
- European Bioinformatics Institute (EBI)482
- ERGA Knowledge Hub128
- GTN111
- GOBLET108
- Australian BioCommons88
- Bioinformatics Visualization72
- Software Carpentry70
- ELXIR-UK DaSH62
- de.NBI33
- Khan Academy Statistics32
- BY-COVID25
- Canadian Bioinformatics Workshops25
- Bioconductor24
- Coding for Reproducible Research (CfRR)19
- Coursera18
- IFB French Institute of Bioinformatics13
- SIB Swiss Institute of Bioinformatics11
- VHP4Safety10
- Bioschemas9
- Data Carpentry9
- DTLS - Dutch Techcentre For Life Sciences7
- Data Steward team Ghent University6
- eNanoMapper6
- ELIXIR5
- LIPID MAPS5
- VIB Training & Conferences5
- ELIXIR Slovenia4
- InterMine4
- BioData.pt3
- Bioinformatics and Biomathematics Training Hub3
- Centre for Genomic Regulation (CRG)3
- ELIXIR Norway3
- NanoCommons3
- Barcelona Supercomputing Center (BSC)2
- Department of Bioinformatics - BiGCaT, Maastricht University2
- ELIXIR Estonia2
- ELIXIR: The Czech Republic Node2
- NBIS2
- Biomedical Sciences Research Center "Alexander Fleming"1
- CSC - IT Center for Science1
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- Danish National Health Data Science Sandbox1
- ExCALIBUR1
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- Keyword
- R307
- Genomics140
- Python125
- Transcriptomics119
- Next generation sequencing115
- RNA-seq113
- Bioinformatics82
- Data management82
- Statistics75
- Machine learning65
- Data science64
- Unix/Linux60
- Single-cell sequencing59
- FAIR data56
- Reproducibility56
- Variant analysis48
- Data visualization47
- Version control47
- Workflows45
- Genome assembly41
- General36
- Genome annotation36
- Metagenomics33
- Genome28
- Molecular28
- FAIR27
- Long read sequencing26
- Nextflow26
- data management24
- Containerization22
- Microbiology22
- Spatial transcriptomics22
- High performance computing21
- Shiny21
- Docker20
- RDM20
- sensitive data19
- CfRR19
- Phylogenetics19
- REDCap19
- programming19
- reproducible research19
- scientific computing19
- Comparative genomics18
- life-sciences18
- Artificial intelligence17
- Galaxy17
- ChIP-seq16
- Cloud computing15
- Anatomy Physiology and Atlases14
- Image analysis14
- Quarto14
- Epigenetics13
- Pathways and Networks13
- Proteomics13
- Shell13
- ATAC-seq12
- Enrichment analysis12
- Europe PMC12
- Introduction12
- bioinformatics12
- health-informatics12
- metadata12
- Analysis11
- Cells and Organisms11
- Introduction bioinformatics11
- Multiomics11
- Pathway11
- Programming11
- Rmarkdown11
- Snakemake11
- plant phenotyping11
- Extras10
- Julia10
- Literature search10
- Singularity10
- databases10
- Deep learning9
- Epidemiology9
- FAIRsharing9
- Population genetics9
- Python biologists9
- REMBI9
- computer-science9
- metagenomics9
- policies9
- standards9
- Database Management8
- Git8
- Inferential statistics8
- PDBe8
- Populations8
- Regex8
- Science Communication8
- Systems biology8
- algorithms8
- Biomedical Literature7
- Data submission7
- Information visualisation7
- Intro7
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- Competency level
- Not specified
- Beginner910
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- Licence
- License Not Specified1624
- Creative Commons Attribution 4.0 International350
- MIT License101
- Creative Commons Attribution Share Alike 4.0 International85
- GNU General Public License v3.0 only44
- Creative Commons Zero v1.0 Universal33
- BSD 3-Clause "New" or "Revised" License14
- Apache License 2.012
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International10
- Creative Commons Attribution Non Commercial Share Alike 4.0 International8
- Creative Commons Attribution Non Commercial 4.0 International5
- Artistic License 2.02
- GNU Affero General Public License v3.0 only2
- Other (Not Open)2
- Creative Commons Attribution 2.0 Generic1
- Do What The F*ck You Want To Public License1
- The Unlicense1
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- Target audience
- PhD students134
- Clinicians118
- Novice44
- Intermediate26
- Researchers25
- Students22
- Biologists, Genomicists, Computer Scientists19
- Life Science Researchers17
- post-docs15
- Biologists14
- bioinformaticians14
- Beginners13
- Post-Doctoral Fellows13
- life scientists13
- Graduate Students12
- beginner bioinformaticians12
- Bench biologists10
- Trainers10
- biocurators8
- PhD5
- Training Designers5
- Training instructors5
- General Interest4
- Life Scientists4
- postgrad4
- Bioinformatician3
- Bioinformaticians3
- data stewards3
- postdoc3
- software developers, bioinformaticians3
- teachers3
- Master students2
- Postgraduate students2
- Scientists2
- Toxicologists2
- Training Coordinators2
- Training Organisers2
- Undergraduate students2
- biology and bioinformatics sophomore undergraduates2
- plant researchers2
- postdocs2
- Anyone interested in bioinformatics1
- Anyone wants to start using the Unix/Linux OS1
- Anyone who wants to become a good trainer or teacher1
- Bachelor students1
- Beginner informatics1
- Bioinformatics1
- Biomedical researchers1
- Clinical Scientists1
- DMP writers1
- Data Access Committeses from the EGA1
- Data Scientists1
- ELIXIR members1
- Early Career Researcher1
- Educators1
- Grad students1
- Graduate students1
- High School Students1
- Lecturers1
- Life sciences1
- Ontologists1
- PhD Students1
- PhD candidates1
- Postdoctoral researchers1
- Professors1
- Prospective and existing trainers1
- Researcher in life sciences1
- Researchers and bioinformaticians in other projects interested in depositiong data at the EGA1
- Researchers and bioinformaticians involved in the VEIS project1
- Researchers in Life Sciences1
- Scientific community1
- Structural Biologists1
- Technicians1
- The course is aimed at research scientists with a minimum of a degree in a biological discipline, including laboratory and clinical staff, as well as specialists in related fields.1
- This webinar is aimed at scientists with an interest in learning more about the Europe PMC and optimising their literature searches.1
- This workshop is aimed at PhD students within the PhD programme "Genetics, Molecular and Cellular Biology" (University of Pavia) and the PhD programmme "Biomolecular Sciences and Biotechnology" (IUSS, University School for Advanced Studies Pavia.1
- University and College Level Students1
- Users1
- Wet-lab researchers and bioinformaticians who want to access scientific literature and data programmatically.1
- clinicians and informaticians interested in cancer genetics1
- computational scientists1
- data managers1
- early stage phytopathogen researchers1
- experimeintal biologist researchers1
- field biologist researchers1
- geneticists1
- healthcare professionals1
- high school1
- life science researchers1
- master1
- postdoctoral researchers1
- principle investigators1
- programmers1
- systems biologists1
- web developers1
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- Author
- The Carpentries Incubator52
- SIB Swiss Institute of Bioinformatics43
- bioinformatics.ca35
- bebatut27
- bgruening25
- Michelle Brazas21
- NBIS - National Bioinformatics Infrastructure Sweden20
- posit-conf-202320
- Coding for Reproducible Research Initiative19
- Saskia Lawson-Tovey19
- The Gulbenkian Training Programme in Bioinformatics19
- Terri Attwood18
- UC Davis Bioinformatics Core Training Page18
- Data Carpentry17
- Teaching materials at the Harvard Chan Bioinformatics Core17
- posit::conf(2024)17
- Martin Morgan15
- Samaha, Georgina15
- CRUK CI Bioinformatics Core13
- shiltemann13
- nekrut12
- Laura Cooper11
- Canadian Bioinformatics Workshops10
- Fred Hutch Data Science Lab10
- Paul Yorke10
- Bérénice Batut9
- ELIXIR Estonia9
- allegra.via Via9
- rstudio::conf(2022)9
- Egon Willighagen8
- Sundeep Agarwal8
- Biocore@CRG7
- Bioinformatics, Rockefeller University7
- Maria Levchenko7
- Saskia Hiltemann7
- Sergio Martínez Cuesta7
- pajanne7
- stortebecker7
- Andrew Mason6
- BU-ISCIII6
- Beecroft, Sarah6
- Deshpande, Nandan6
- Software Carpentry6
- VIB Training & Conferences6
- Williams, Sarah6
- erxleben6
- joachimwolff6
- Aidan Budd5
- Dayane Araujo5
- ELIXIR Europe Training5
- Emma Karoune5
- Gustafsson, Johan5
- Hadley Wickham5
- Manuel Corpas5
- MolSSI Education5
- Patricia Palagi5
- The Carpentries Lab5
- Willet, Cali5
- blankclemens5
- cambiotraining5
- erasche5
- jhudsl5
- nsoranzo5
- slugger705
- Alex's Lemonade Stand Foundation4
- András Aszódi4
- Barugahare, Adele4
- BioNT Training4
- Computational Biology and Bioinformatics at UCLouvain4
- Geaghan, Michael4
- Goudey, Benjamin4
- Hall, Grace4
- Health Data Science Sandbox4
- Helena Rasche4
- Institut Français de Bioinformatique (IFB)4
- Jaya, Frederick4
- Morgan, Steven4
- Nelson, Tiffanie4
- Price, Gareth4
- RStudio4
- Rami Krispin4
- Ted Laderas4
- Waldron Lab at the CUNY SPH4
- coderefinery4
- malloryfreeberg4
- tnabtaf4
- yvanlebras4
- Björn Grüning3
- Boas Pucker3
- Bruno Gaeta3
- C. Li3
- Celia van Gelder3
- Chew, Tracy3
- Christine Staiger3
- Chung, Jessica3
- Dave Clements3
- Eija Korpelainen3
- Elvina Gountouna3
- Lukas Weber3
- Maria Victoria ...3
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- Contributor
- Toby Hodges81
- François Michonneau68
- Erin Becker62
- Zhian N. Kamvar59
- Mine Cetinkaya-Rundel56
- Katrin Leinweber53
- Tracy Teal53
- Raniere Silva52
- W. Trevor King51
- maneesha51
- Andy Boughton50
- Robert Andrews50
- Katie Anne Mills47
- Maxim Belkin47
- Canadian Bioinformatics Workshops43
- David Pérez-Suárez43
- Gabriel A. Devenyi43
- Abby Cabunoc Mayes41
- EvanWill41
- Ian Lee41
- Jon Pipitone41
- Jonah Duckles41
- Michael Hansen41
- Piotr Banaszkiewicz41
- Brandon Curtis40
- David Mawdsley40
- Greg Wilson40
- Jemma Stachelek40
- Remi Rampin40
- Allen Lee39
- Andrew Sanchez39
- Michael R. Crusoe39
- James Allen38
- Jeff Oliver38
- Joel Nothman38
- Munazah Andrabi38
- Nick Young38
- Rémi Emonet38
- naught10138
- Rayna M Harris37
- William L. Close37
- Sarah Brown35
- Gerard Capes33
- Renato Alves30
- trk30
- Ana Conrado29
- Stephan Druskat29
- Christina K.28
- K.E. Koziar28
- Alex Whan27
- Paula Andrea Martinez26
- Michael Joseph25
- Anthony Gitter24
- João Rodrigues24
- Geert van Geest23
- Sarah Stevens22
- Robert Davey21
- actions-user21
- Henry Schreiner20
- Hilmar Lapp20
- The Gulbenkian Training Programme in Bioinformatics19
- Paola Prieto18
- C. Titus Brown17
- Aaron O'Leary16
- Annajiat Alim Rasel16
- Benson Muite16
- Bérénice Batut16
- Will Gammerdinger16
- Hannah Lyman15
- Mark Fernandes15
- Meeta Mistry15
- Radhika Khetani15
- Trevor Bekolay15
- Bianca Peterson14
- Candace Savonen14
- John Blischak14
- Carrie Wright13
- Karen Word13
- Lex Nederbragt13
- Mateusz Kuzak13
- Wolmar Nyberg Åkerström13
- jhudsl-robot13
- zhibinlu13
- Andrew Reid12
- Ethan White12
- JCSzamosi12
- Laurent Gatto12
- Stéphane Guillou12
- Ariel Rokem11
- Hugo Tavares11
- Ivan Gonzalez11
- Jihe Liu11
- Karen Cranston11
- Kate Isaac11
- Kilian Lieret11
- Miguel Cardoso11
- Niclas Jareborg11
- Pete11
- Radovan Bast11
- Saskia Hiltemann11
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- Resource type
- Recorded webinar300
- Video127
- e-learning121
- Tutorial83
- Course materials48
- tutorial44
- slides39
- Webinar33
- video31
- Slides27
- exercise25
- Presentation16
- Poster14
- Slideshow12
- Training materials11
- hands-on tutorial9
- course materials7
- Talk5
- lessons4
- PDF3
- How-to guide2
- Life Sciences Literature Database2
- Scripts2
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- Book1
- Documentation1
- E-Learning1
- E-learning + workshop1
- Notes1
- Tool1
- additional reading1
- case studies1
- didactic activities1
- e-Learning1
- handbook1
- implementation guidelines1
- knowledgebase1
- online modules1
- podcast1
- tutorials1
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- Related resource
- Input datasets32
- Research Data Management in Life Sciences11
- Associated slides9
- Proteomics dataset5
- Sequence analysis dataset5
- Transcriptomics dataset5
- Assembly dataset4
- Variant Analysis dataset4
- Assembly slides3
- Development in Galaxy slides3
- ChIP-Seq data analysis dataset2
- Epigenetics dataset2
- Genome Annotation dataset2
- Metagenomics dataset2
- Sequence analysis slides2
- Beacon v2: a discovery tool for genomic and pheno-clinical data1
- COBRA Toolbox1
- Contributing to the Galaxy Training Material slides1
- DMPortal1
- Data Stewardship Wizard1
- DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- EGA Submitter Portal Tutorial1
- ELIXIR's Impact Toolkit1
- GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Galaxy Server administration slides1
- Genome Annotation slides1
- Genomics England PanelApp1
- Introduction to Galaxy Analyses dataset1
- Introduction to Galaxy dataset1
- Introduction to the EGA and sharing sensitive data1
- Slides | Beacon v2: a discovery tool for genomic and pheno-clinical data1
- Slides | DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- Slides | GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Slides | Introduction to the EGA and sharing sensitive data1
- Statistics dataset1
- Transcriptomics slides1
- User Interface and Features dataset1
- VEIS webinar: The essentials of DUO codes | Presentation1
- VEIS webinar: The essentials of DUO codes | Video1
- elabFTW1
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- Node
- Switzerland974
- EMBL-EBI483
- United Kingdom76
- Germany35
- Netherlands25
- Czech Republic17
- France13
- Belgium12
- Slovenia6
- Spain5
- Norway4
- Sweden4
- Finland3
- Italy3
- Portugal3
- Estonia2
- Luxembourg2
- Greece1
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- Collection
- PHENotyping and EnviroTyping (PHENET training collection)19
- RDMbites: REDCap18
- RDMbites: Image data11
- RDMbites: Sequencing data9
- RDMbites: Data management essentials8
- ELIXIR Federated Human Data Community6
- PINK project6
- ELIXIR Biodiversity Community5
- ELIXIR Systems Biology Community: training events and materials5
- ELIXIR Toxicology Community5
- RDMbites: Sensitive data5
- ELIXIR SIS-Containers - collection of training materials4
- RDMbites: Equality, Diversity, Inclusion and Justice in RDM4
- VEIS - Value of the EGA for Industry and Society3
- Elements of Data Management2
- Impact of research infrastructures1
- VIP138 SLOT Online Terbaik saat ini di Indonesia1
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- Status
- Active121
- Under development3
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