Training materials
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e-learning
Genome annotation with Maker (short)
•• IntermediateGenomics Genome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Refining Genome Annotations with Apollo (prokaryotes)
•• IntermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 biodiversity gmod jbrowse1 microgalaxy … -
e-learning
CRISPR screen analysis
• BeginnerGenomics CRISPR Genome Annotation cell line essential genes genome editing -
e-learning
Genome annotation with Prokka
• BeginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
e-learning
Masking repeats with RepeatMasker
• BeginnerGenomics Sequence composition, complexity and repeats Genome Annotation biodiversity eukaryote -
e-learning
Genome annotation with Funannotate
•• IntermediateGenomics Gene and protein families Genome Annotation biodiversity eukaryote gmod jbrowse1 -
slides
High Performance Computing for Pairwise Genome Comparison
• BeginnerGenomics Genome Annotation -
slides
Essential genes detection with Transposon insertion sequencing
• BeginnerGenomics Genome Annotation bacteria essential genes tnseq -
slides
Refining Genome Annotations with Apollo
• BeginnerGenomics Genome Annotation prokaryote -
slides
Introduction to CRISPR screen analysis
• BeginnerGenomics Genome Annotation