Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Biological sequences2
    • Community analysis2
    • Comparative transcriptomics2
    • Environmental microbiology2
    • Metagenomics2
    • Microbial ecology2
    • Microbiome2
    • Molecular community analysis2
    • Sequence analysis2
    • Sequence databases2
    • Shotgun metagenomics2
    • Transcriptome2
    • Transcriptomics2
    • Antimicrobial stewardship1
    • Assembly1
    • Disease1
    • Epidemiology1
    • Exomes1
    • Genome annotation1
    • Genomes1
    • Genomics1
    • Medical microbiology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Mobile genetic elements1
    • Molecular infection biology1
    • Molecular microbiology1
    • Pathology1
    • Personal genomics1
    • Public health1
    • Public health and epidemiology1
    • Sequence assembly1
    • Synthetic genomics1
    • Taxonomy1
    • Transposons1
    • Viral genomics1
    • Whole genomes1
    • Show N_FILTERS more
    • Tool
    • ggplot2
    • Galaxy298
    • FastQC35
    • MultiQC23
    • SAMtools21
    • BEDTools16
    • scikit-learn16
    • JBrowse15
    • BWA14
    • DeepTools13
    • SCANPY13
    • fastp13
    • Cutadapt12
    • BLAST11
    • Falco11
    • QUAST11
    • GEMINI10
    • STAR10
    • taxonomy_krona_chart10
    • BUSCO9
    • NanoPlot9
    • FreeBayes8
    • Trimmomatic8
    • Bandage7
    • msConvert7
    • BamTools6
    • Biopython6
    • Galaxy Image Analysis6
    • HISAT26
    • Unicycler6
    • Workflow4Metabolomics6
    • gffread6
    • scikit-image6
    • BCFtools5
    • FASTX-Toolkit5
    • Flye5
    • Galactic Circos5
    • MaxQuant5
    • MetaPhlAn5
    • RSeQC5
    • Trim Galore5
    • anndata5
    • kraken25
    • xcms5
    • Bowtie 24
    • KrakenTools4
    • MACS4
    • MAFFT4
    • MSstats4
    • Minimap24
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC4
    • Newick Utilities4
    • Open Babel4
    • Salmon4
    • StringTie4
    • annotatemyids4
    • compute_sequence_length4
    • gffcompare4
    • mothur4
    • seqtk4
    • Apollo3
    • Bracken3
    • Bwa-mem23
    • Cardinal3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DESeq23
    • Diamond3
    • DropletUtils3
    • FastTree3
    • GOseq3
    • GraPhlAn3
    • Merqury3
    • OMArk3
    • RStudio3
    • SeqCode3
    • SortMeRNA3
    • Stacks3
    • UniProt3
    • bx-python3
    • export2graphlan3
    • humann3
    • pyGenomeTracks3
    • snippy3
    • Bakta2
    • Bio3D2
    • Bowtie2
    • COMBAT-TB Workbench2
    • ChIPpeakAnno2
    • CheckM2
    • Circos2
    • Combine Metaphlan and HUMAnN2
    • European Nucleotide Archive (ENA)2
    • FASTQE2
    • FeatureCounts2
    • GECKO2
    • GOEnrichment2
    • GenomeScope 2.02
    • Gromacs2
    • HUMAnN22
    • Heinz2
    • Show N_FILTERS more
    • Content provider
    • GTN7
    • Show N_FILTERS more
    • Keyword
    • Introduction to Galaxy Analyses2
    • Microbiome2
    • Transcriptomics2
    • cyoa2
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • QC1
    • Single Cell1
    • bulk1
    • collections1
    • deutsch1
    • drosophila1
    • español1
    • italiano1
    • microgalaxy1
    • rna-seq1
    • transcriptomics1
    • Show N_FILTERS more
    • Competency level
    • Beginner7
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International7
    • Show N_FILTERS more
    • Target audience
    • Students7
    • Show N_FILTERS more
    • Author
    • Bérénice Batut3
    • Maria Doyle2
    • Nadia Goué2
    • Saskia Hiltemann2
    • Anika Erxleben1
    • Anne Fouilloux1
    • Christopher Barnett1
    • Clemens Blank1
    • Dave Clements1
    • Didier Debroas1
    • Engy Nasr1
    • Lucille Delisle1
    • Mallory Freeberg1
    • Michele Maroni1
    • Mo Heydarian1
    • Morgan Howells1
    • Nicola Soranzo1
    • Olha Nahorna1
    • Paul Zierep1
    • Pavankumar Videm1
    • Peter van Heusden1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann7
    • Björn Grüning6
    • Bérénice Batut4
    • Helena Rasche4
    • Nicola Soranzo3
    • Cristóbal Gallardo2
    • Hans-Rudolf Hotz2
    • Lucille Delisle2
    • Martin Čech2
    • Wendi Bacon2
    • Wolfgang Maier2
    • Alex Ostrovsky1
    • Amirhossein Naghsh Nilchi1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Anthony Bretaudeau1
    • Armin Dadras1
    • Carlos Chee Mendonça1
    • Clea Siguret1
    • Clemens Blank1
    • Daniela Schneider1
    • David López1
    • Deepti Varshney1
    • Ekaterina Polkh1
    • Engy Nasr1
    • Florian Heyl1
    • Graeme Tyson1
    • Jennifer Hillman-Jackson1
    • Maria Doyle1
    • Marius van den Beek1
    • Matthias Bernt1
    • Mehmet Tekman1
    • Michele Maroni1
    • Morgan Howells1
    • Mélanie Petera1
    • Nadia Goué1
    • Nate Coraor1
    • Niall Beard1
    • Paul Zierep1
    • Pavankumar Videm1
    • Simon Bray1
    • William Durand1
    • Show N_FILTERS more
    • Resource type
    • e-learning7
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets
    • Associated Workflows11
    • RNA-seq data package1
    • Show N_FILTERS more
  • Only show materials from current space
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: ggplot2

and Across all spaces: true

and Related resources: Associated Training Datasets

7 materials found
  • e-learning

    Introduction to Galaxy as an RDM platform

    • Beginner
    Introduction to Galaxy Analyses
  • e-learning

    Evaluating Reference Data for Bulk RNA Deconvolution

    • Beginner
    Single Cell transcriptomics
  • e-learning

    Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data

    • Beginner
    Metagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • Beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Visualization of RNA-Seq results with heatmap2

    • Beginner
    Transcriptomics Transcriptomics
  • e-learning

    Reference-based RNA-Seq data analysis

    • Beginner
    Transcriptomics QC Transcriptomics bulk collections cyoa deutsch drosophila español italiano …
  • e-learning

    Galaxy Basics for everyone

    • Beginner
    Introduction to Galaxy Analyses
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.