e-Learning
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34 e-learning materials found
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ELIXIR TeSS
e-learning
Detection of shared microbial strains with SameStr
•• IntermediateMetagenomics Microbial ecology Taxonomy Microbiome metagenomics microbiome microgalaxy -
ELIXIR TeSS
e-learning
Remove contamination and host reads
• BeginnerMetagenomics Microbial ecology Microbiome host-removal metagenomics microgalaxy preprocessing -
ELIXIR TeSS
e-learning
Building and Annotating Metagenome-Assembled Genomes (MAGs) from Short Metagenomics Paired Reads
•• IntermediateMetagenomics Microbial ecology Sequence assembly Microbiome assembly binning metagenomics microgalaxy -
ELIXIR TeSS
e-learning
Indexing and profiling microbes with MetaSBT
• BeginnerMetagenomics Microbial ecology Taxonomy Microbiome diversity metagenomics taxonomic profiling -
ELIXIR TeSS
e-learning
MGnify v5.0 Amplicon Pipeline
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome amplicon microbiome taxonomic abundance taxonomy -
ELIXIR TeSS
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• BeginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome -
ELIXIR TeSS
e-learning
Identifying Mycorrhizal Fungi from ITS2 sequencing using LotuS2
• BeginnerMetagenomics Microbial ecology Microbiome ecology fungi -
ELIXIR TeSS
e-learning
Exploring environmental DNA: Metabarcoding workflow and open data resources for eDNA research
Biodiversity Environmental sciences Metabarcoding Metagenomics Microbial ecology Data management Sequencing eDNA Environmental DNA
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ELIXIR TeSS
e-learning
QIIME 2 Cancer Microbiome Intervention
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome diversity metabarcoding microgalaxy … -
ELIXIR TeSS
e-learning
QIIME 2 Moving Pictures
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding Microbiome diversity metagenomics microgalaxy taxonomic profiling