Training materials
10 materials found
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e-learning
Where to start with bioimage analysis in Galaxy
• BeginnerImaging Bioimaging Histology Imaging Microscopy -
e-learning
Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools
•• IntermediateImaging Conversion Imaging Multi-channel image Object feature extraction ROI selection -
e-learning
Training Custom YOLO Models for Segmentation of Bioimages
•• IntermediateImaging Deep learning Image annotation Image segmentation Imaging -
e-learning
Voronoi segmentation
•• IntermediateImaging Image segmentation Imaging Multi-channel image Object counting Overlay Tessellation -
e-learning
Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
• BeginnerImaging Image segmentation Imaging Parameter optimisation Validation -
e-learning
Using BioImage.IO models for image analysis in Galaxy
•• IntermediateImaging Deep learning Image annotation Image segmentation Imaging -
e-learning
Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
• BeginnerImaging IDR dataset Imaging Overlay Rasterisation Spot detection -
e-learning
Tracking of mitochondria and capturing mitoflashes
•• IntermediateImaging Imaging Isolated object tracking Temporal analysis Time-lapse data -
e-learning
Analyse HeLa fluorescence siRNA screen
•• IntermediateImaging Fluorescence microscopy High-throughput screening Image segmentation Image thresholding Imaging Object feature extraction Overlay -
e-learning
Introduction to Image Analysis using Galaxy
• BeginnerImaging Conversion Fluorescence microscopy Image segmentation Image thresholding Imaging Object counting Overlay