Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Genetic variation
    • Biological sequences9
    • Sequence analysis9
    • Sequence databases9
    • Assembly8
    • Sequence assembly8
    • Community analysis7
    • Comparative transcriptomics7
    • Environmental microbiology7
    • Metagenomics7
    • Microbial ecology7
    • Microbiome7
    • Molecular community analysis7
    • Shotgun metagenomics7
    • Transcriptome7
    • Transcriptomics7
    • Exomes6
    • Genome annotation6
    • Genomes6
    • Genomics6
    • Personal genomics6
    • Synthetic genomics6
    • Viral genomics6
    • Whole genomes6
    • DNA variation5
    • Genomic variation5
    • Mutation5
    • Polymorphism5
    • Somatic mutations5
    • Taxonomy5
    • Epigenomics4
    • Antimicrobial stewardship3
    • Epidemiology3
    • Medical microbiology3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • Public health3
    • Public health and epidemiology3
    • Biodiversity2
    • Function analysis2
    • Functional analysis2
    • Metatranscriptomics2
    • Protein function analysis2
    • Protein function prediction2
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Bioinformatics1
    • Communicable disease1
    • Computational ecology1
    • DNA polymorphism1
    • De novo genome sequencing1
    • Disease1
    • Ecoinformatics1
    • Ecological informatics1
    • Ecology1
    • Ecosystem science1
    • Extensive drug resistance (XDR)1
    • FAIR data1
    • Findable, accessible, interoperable, reusable data1
    • Genome sequencing1
    • Infectious disease1
    • MicroRNA sequencing1
    • Microsatellites1
    • Multidrug resistance1
    • Multiple drug resistance (MDR)1
    • Multiresistance1
    • Pandrug resistance (PDR)1
    • Pathology1
    • Pipelines1
    • RFLP1
    • RNA sequencing1
    • RNA-Seq1
    • RNA-Seq analysis1
    • SNP1
    • Single nucleotide polymorphism1
    • Small RNA sequencing1
    • Small RNA-Seq1
    • Small-Seq1
    • Software integration1
    • Tool integration1
    • Tool interoperability1
    • Total drug resistance (TDR)1
    • Transcriptome profiling1
    • Transmissible disease1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • WGS1
    • WTSS1
    • Whole genome resequencing1
    • Whole genome sequencing1
    • Whole transcriptome shotgun sequencing1
    • Show N_FILTERS more
    • Tool
    • FastQC
    • Galaxy16
    • BWA9
    • FreeBayes6
    • SAMtools6
    • BCFtools4
    • GEMINI4
    • Falco3
    • QualiMap3
    • Trimmomatic3
    • Vcflib3
    • fastp3
    • BamTools2
    • MAFFT2
    • MultiQC2
    • SRA Software Toolkit2
    • iVar2
    • snippy2
    • BridgeDb1
    • COMBAT-TB Workbench1
    • EGA1
    • FREEC1
    • Galactic Circos1
    • JBrowse1
    • Jvarkit1
    • NCBI Resources1
    • Nextclade1
    • Trim Galore1
    • UCSC Genome Browser Utilities1
    • V-pipe1
    • VAPOR1
    • VarScan1
    • compute_sequence_length1
    • ggplot21
    • iqtree1
    • lofreq1
    • pangolin1
    • seqtk1
    • snpEff1
    • Show N_FILTERS more
    • Content provider
    • GTN5
    • Show N_FILTERS more
    • Keyword
    • Variant Analysis5
    • microgalaxy2
    • prokaryote2
    • one-health1
    • tuberculosis1
    • Show N_FILTERS more
    • Competency level
    • Beginner4
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • Anton Nekrutenko2
    • Wolfgang Maier2
    • Alex Ostrovsky1
    • Anika Erxleben1
    • Björn Grüning1
    • Bérénice Batut1
    • David Salgado1
    • Katarzyna Kamieniecka1
    • Khaled Jum'ah1
    • Krzysztof Poterlowicz1
    • Nick Stoler1
    • Peter van Heusden1
    • Simon Gladman1
    • Thoba Lose1
    • Torsten Houwaart1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning5
    • Helena Rasche5
    • Saskia Hiltemann5
    • Bérénice Batut4
    • Niall Beard3
    • Nicola Soranzo3
    • Wolfgang Maier3
    • Anthony Bretaudeau2
    • Gildas Le Corguillé2
    • Mélanie Petera2
    • William Durand2
    • Alex Ostrovsky1
    • Alexandre Cormier1
    • Anton Nekrutenko1
    • Armin Dadras1
    • Cristóbal Gallardo1
    • Ekaterina Polkh1
    • Katarzyna Kamieniecka1
    • Khaled Jum'ah1
    • Linelle Abueg1
    • Maria Doyle1
    • Martin Čech1
    • Mateo Boudet1
    • Nate Coraor1
    • Peter van Heusden1
    • Simon Gladman1
    • Teresa Müller1
    • Tristan Reynolds1
    • Verena Moosmann1
    • Vijay1
    • Show N_FILTERS more
    • Resource type
    • e-learning5
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets5
    • Associated Workflows5
    • Show N_FILTERS more
    • Collection
    • ELIXIR hCNV community - collection of courses and materials.1
    • Show N_FILTERS more
  • Only show materials from current space
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Genetic variation

and Tools: FastQC

and Across all spaces: true

5 materials found
  • e-learning

    Somatic Variant Discovery from WES Data Using Control-FREEC

    • Beginner
    Genetic variation Variant Analysis
  • e-learning

    Exome sequencing data analysis for diagnosing a genetic disease

    • Beginner
    Genetic variation Variant Analysis
  • e-learning

    M. tuberculosis Variant Analysis

    •• Intermediate
    Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
  • e-learning

    Calling variants in non-diploid systems

    • Beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
  • e-learning

    Calling very rare variants

    • Beginner
    Genetic variation Variant Analysis
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.