Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Sequence assembly
    • Epigenomics6
    • Assembly3
    • Comparative transcriptomics3
    • Exomes3
    • Genome annotation3
    • Genomes3
    • Genomics3
    • Personal genomics3
    • Synthetic genomics3
    • Transcriptome3
    • Transcriptomics3
    • Viral genomics3
    • Whole genomes3
    • Biological sequences2
    • Community analysis2
    • Environmental microbiology2
    • Metagenomics2
    • Microbial ecology2
    • Microbiome2
    • Molecular community analysis2
    • Sequence analysis2
    • Sequence databases2
    • Shotgun metagenomics2
    • Taxonomy2
    • Antimicrobial stewardship1
    • Biodiversity1
    • ChIP-exo1
    • ChIP-seq1
    • ChIP-sequencing1
    • Chip Seq1
    • Chip sequencing1
    • Chip-sequencing1
    • Disease1
    • Epidemiology1
    • Low complexity sequences1
    • Medical microbiology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Molecular infection biology1
    • Molecular microbiology1
    • Nucleic acid repeats1
    • Pathology1
    • Protein repeats1
    • Protein sequence repeats1
    • Public health1
    • Public health and epidemiology1
    • Repeat sequences1
    • Sequence complexity1
    • Sequence composition1
    • Sequence composition, complexity and repeats1
    • Sequence repeats1
    • Show N_FILTERS more
    • Tool
    • BEDTools
    • Galaxy31
    • QUAST12
    • BUSCO9
    • Bandage8
    • FastQC8
    • Flye6
    • NanoPlot6
    • Unicycler5
    • fastp5
    • Merqury4
    • Minimap24
    • MultiQC4
    • SAMtools4
    • BWA3
    • BamTools3
    • Bwa-mem23
    • GenomeScope 2.03
    • JBrowse3
    • gfastats3
    • seqtk3
    • BCFtools2
    • Cutadapt2
    • Medaka2
    • OMArk2
    • SPAdes2
    • STAR2
    • VelvetOptimiser2
    • dRep2
    • gffread2
    • kraken22
    • pilon2
    • snippy2
    • ABRicate1
    • BLAST1
    • Bakta1
    • Bowtie 21
    • COMBAT-TB Workbench1
    • CONCOCT1
    • CheckM1
    • Circos1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • CoverM1
    • Diamond1
    • Falco1
    • FastTree1
    • Filtlong1
    • FreeBayes1
    • Galactic Circos1
    • Helixer1
    • Jvarkit1
    • KrakenTools1
    • MEGAHIT1
    • MLST1
    • MaxBin1
    • MetaBAT 21
    • NGSUtils1
    • Newick Utilities1
    • Polypolish1
    • QualiMap1
    • Racon1
    • SALSA1
    • SRA Software Toolkit1
    • Smudgeplots1
    • Vcflib1
    • compute_sequence_length1
    • dastool1
    • ggplot21
    • metaspades1
    • purge_dups1
    • shovill1
    • taxonomy_krona_chart1
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Show N_FILTERS more
    • Keyword
    • Assembly2
    • microgalaxy2
    • Heatmap1
    • Microbiome1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • VGP1
    • biodiversity1
    • cyoa1
    • eukaryote1
    • gmod1
    • jbrowse11
    • pacbio1
    • prokaryote1
    • Show N_FILTERS more
    • Competency level
    • Beginner2
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Anton Nekrutenko2
    • Delphine Lariviere2
    • Alex Ostrovsky1
    • Anna Syme1
    • Brandon Pickett1
    • Bérénice Batut1
    • Cristóbal Gallardo1
    • Engy Nasr1
    • Giulio Formenti1
    • Helena Rasche1
    • Linelle Abueg1
    • Marcella Sozzoni1
    • Paul Zierep1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning3
    • Bérénice Batut3
    • Helena Rasche3
    • Saskia Hiltemann3
    • Anton Nekrutenko2
    • Cristóbal Gallardo2
    • Anna Syme1
    • Anthony Bretaudeau1
    • Deepti Varshney1
    • Delphine Lariviere1
    • Engy Nasr1
    • Hans-Rudolf Hotz1
    • Linelle Abueg1
    • Maria Doyle1
    • Marius van den Beek1
    • Niall Beard1
    • Nicola Soranzo1
    • Paul Zierep1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Only show materials from current space
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Sequence assembly

and Tools: BEDTools

and Across all spaces: true

3 materials found
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • Beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

    •• Intermediate
    Sequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Making sense of a newly assembled genome

    • Beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.