Training materials
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ELIXIR TeSS
e-learning
Remove contamination and host reads
• BeginnerMetagenomics Microbial ecology Microbiome host-removal metagenomics microgalaxy preprocessing -
ELIXIR TeSS
e-learning
Building and Annotating Metagenome-Assembled Genomes (MAGs) from Short Metagenomics Paired Reads
•• IntermediateMetagenomics Microbial ecology Sequence assembly Microbiome assembly binning metagenomics microgalaxy -
ELIXIR TeSS
e-learning
Calculating α and β diversity from microbiome taxonomic data
• BeginnerMetagenomics Microbial ecology Microbiome diversity metagenomics -
ELIXIR TeSS
e-learning
Identification of the micro-organisms in a beer using Nanopore sequencing
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore -
ELIXIR TeSS
e-learning
Taxonomic Profiling and Visualization of Metagenomic Data
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling -
ELIXIR TeSS
e-learning
Assembly of metagenomic sequencing data
• BeginnerMetagenomics Sequence assembly Microbial ecology Microbiome assembly metagenomics microgalaxy -
ELIXIR TeSS
hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• BeginnerMetagenomics metagenomics metagenomics taxonomic profiling -
ELIXIR TeSS
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• BeginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
ELIXIR TeSS
hands-on tutorial
Hands-on for 'Assembly of metagenomic sequencing data' tutorial
• BeginnerMetagenomics metagenomics assembly metagenomics -
ELIXIR TeSS
hands-on tutorial
Hands-on for 'Identification of the micro-organisms in a beer using Nanopore sequencing' tutorial
• BeginnerMetagenomics metagenomics nanopore beer citizen science metagenomics
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